RNA–Protein interactions for RNA: ENST00000506885.5

CLDND1-212, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-212ENST00000506885 CALCOCO2Q13137 446 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 TRAM2Q15035 370 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 ZIC1Q15915 447 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 UPP1Q16831 310 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 ECSCRQ19T08 205 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 TECRLQ5HYJ1 363 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 TPRG1LQ5T0D9 272 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 CHMP1BQ7LBR1 199 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 PAGE2Q7Z2X7 111 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 OR2W3Q7Z3T1 314 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 ZNF547Q8IVP9 402 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 SNX31Q8N9S9 440 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 NOXO1Q8NFA2 376 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 OR2AP1Q8NGE2 309 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 OR6N2Q8NGY6 317 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 OR2T11Q8NH01 316 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 FNDC8Q8TC99 324 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 PCNPQ8WW12 178 aaKnown RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 TRUB1Q8WWH5 349 aaKnown RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 CCDC127Q96BQ5 260 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 RAB3CQ96E17 227 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 CELF6Q96J87 481 aaKnown RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 ST6GAL2Q96JF0 529 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 ADGRG7Q96K78 797 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 OXGR1Q96P68 337 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 TNFRSF13CQ96RJ3 184 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 ZNF251Q9BRH9 671 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 NAA50Q9GZZ1 169 aaKnown RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 SYT4Q9H2B2 425 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 PPDPFQ9H3Y8 114 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 SAMSN1Q9NSI8 373 aaKnown RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 IMP3Q9NV31 184 aaKnown RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 THUMPD1Q9NXG2 353 aaKnown RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 ZNF282Q9UDV7 671 aaPredicted RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 FAF1Q9UNN5 650 aaPredicted RBP4.12□□□□□ -1.75
CLDND1-212ENST00000506885 HYOU1Q9Y4L1 999 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 FADS3Q9Y5Q0 445 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 TOP2BQ02880 1626 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 PLEKHH1Q9ULM0 1364 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 FHOD3Q2V2M9 1422 aa4.12□□□□□ -1.75
CLDND1-212ENST00000506885 SMCHD1A6NHR9 2005 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 IQCMA0A1B0GVH7 501 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 TMEM213A2RRL7 107 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 SAGE2PA6NJ88 616 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 E7ESA3 106 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 F8VP50 259 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 TYROBPO43914 113 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 OR5F1O95221 314 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 NUDT14O95848 222 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 HOXD4P09016 255 aaPredicted RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 OR9G9P0C7N8 305 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 TRIM49P0CI25 452 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 TRIM49CP0CI26 452 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 RD3LP0DJH9 198 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 SNHG28P0DPA3 235 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 IL12AP29459 219 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 FOXG1P55316 489 aaPredicted RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 FBXW4P57775 412 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 GPX6P59796 221 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 CHRNB3Q05901 458 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 ZNF154Q13106 437 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 QRICH1Q2TAL8 776 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 THEM4Q5T1C6 240 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 OR52E8Q6IFG1 317 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 EMBQ6PCB8 327 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 ZNF790Q6PG37 636 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 TUBA1AQ71U36 451 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 NUFIP2Q7Z417 695 aaKnown RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 CMC1Q7Z7K0 106 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 CRLF3Q8IUI8 442 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 LRRC34Q8IZ02 419 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 LIX1Q8N485 282 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 NRACQ8N912 160 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 CDRT4Q8N9R6 151 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 NECAP1Q8NC96 275 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 OR10G8Q8NGN5 311 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 OR9A4Q8NGU2 314 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 OR2L8Q8NGY9 312 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 OR5K2Q8NHB8 316 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 FANK1Q8TC84 345 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 SLC7A13Q8TCU3 470 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 TCTEX1D2Q8WW35 142 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 BAALCQ8WXS3 180 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 UTP23Q9BRU9 249 aaKnown RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 CABLES2Q9BTV7 478 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 TMEM59Q9BXS4 323 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 TUBB1Q9H4B7 451 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 RNF41Q9H4P4 317 aaPredicted RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 ZNF385DQ9H6B1 395 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 WDR55Q9H6Y2 383 aaPredicted RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 PATZ1Q9HBE1 687 aaKnown RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 AGPAT4Q9NRZ5 378 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 HRASLS2Q9NWW9 162 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 ELOVL2Q9NXB9 296 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 LNPEPQ9UIQ6 1025 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 PRELID1Q9Y255 219 aa4.11□□□□□ -1.75
CLDND1-212ENST00000506885 RCL1Q9Y2P8 373 aaKnown RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 MRPS28Q9Y2Q9 187 aaKnown RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 MRPS18CQ9Y3D5 142 aaKnown RBP4.11□□□□□ -1.75
CLDND1-212ENST00000506885 FRMPD3Q5JV73 1810 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms