RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 OR13C2Q8NGS9 318 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 OR51A7Q8NH64 312 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 GNPDA2Q8TDQ7 276 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 GIPC3Q8TF64 312 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 LIPHQ8WWY8 451 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 ZNF775Q96BV0 537 aaPredicted RBP8.91□□□□□ -0.98
NUP54-203ENST00000504173 OXGR1Q96P68 337 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 BCO1Q9HAY6 547 aa8.91□□□□□ -0.98
NUP54-203ENST00000504173 PDP1Q9P0J1 537 aaPredicted RBP8.91□□□□□ -0.98
NUP54-203ENST00000504173 NOSIPQ9Y314 301 aaKnown RBP8.91□□□□□ -0.98
NUP54-203ENST00000504173 IGKV3D-15A0A087WSY6 115 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 TRAV27A0A087WT01 109 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 UNC119BA6NIH7 251 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 MS4A18H0YCH9 400 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 CDC42EP2O14613 210 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 RNF13O43567 381 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 SERPINI2O75830 405 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 SMNDC1O75940 238 aaKnown RBP eCLIP8.9□□□□□ -0.98
NUP54-203ENST00000504173 IL18BPO95998 194 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 HPRP00739 348 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 ZNF23P17027 643 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 FPR3P25089 353 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 AQP2P41181 271 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 KIR2DL2P43627 348 aaPredicted RBP8.9□□□□□ -0.98
NUP54-203ENST00000504173 POU3F1Q03052 451 aaPredicted RBP8.9□□□□□ -0.98
NUP54-203ENST00000504173 POU4F3Q15319 338 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 TAF11Q15544 211 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 MS4A18Q3C1V0 323 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 ANKDD1AQ495B1 522 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 EEF1A1P5Q5VTE0 462 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 HMBOX1Q6NT76 420 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 C1orf94Q6P1W5 598 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 VWA1Q6PCB0 445 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 SHQ1Q6PI26 577 aaKnown RBP8.9□□□□□ -0.98
NUP54-203ENST00000504173 ZER1Q7Z7L7 766 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 GALNT5Q7Z7M9 940 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 TMEM179BQ7Z7N9 219 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 MRGPRGQ86SM5 289 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 UEVLDQ8IX04 471 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 ANKK1Q8NFD2 765 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 OR6K3Q8NGY3 331 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 OR5K1Q8NHB7 308 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 MOSPD2Q8NHP6 518 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 CENPNQ96H22 339 aaPredicted RBP8.9□□□□□ -0.98
NUP54-203ENST00000504173 MS4A3Q96HJ5 214 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 GPA33Q99795 319 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 PKP2Q99959 881 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 SPOCK3Q9BQ16 436 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 NDEL1Q9GZM8 345 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 SEMA6AQ9H2E6 1030 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 C12orf49Q9H741 205 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 NTN4Q9HB63 628 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 B3GAT1Q9P2W7 334 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 ZNF629Q9UEG4 869 aaPredicted RBP8.9□□□□□ -0.98
NUP54-203ENST00000504173 ING1Q9UK53 422 aaPredicted RBP8.9□□□□□ -0.98
NUP54-203ENST00000504173 PROCRQ9UNN8 238 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 MGAT4BQ9UQ53 548 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 HIF3AQ9Y2N7 669 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 NOX1Q9Y5S8 564 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 FLVCR1Q9Y5Y0 555 aa8.9□□□□□ -0.98
NUP54-203ENST00000504173 NCOA6Q14686 2063 aaPredicted RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 LOC102725191A0A1B0GVB3 256 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 ARRDC5A6NEK1 342 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 FAM90A27PA6NNH2 459 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 EEF1E1-BLOC1S5C9J1V9 151 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 H0YHG0 523 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 EEF1E1O43324 174 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 KLF4O43474 513 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 TRAF3IP2O43734 574 aaPredicted RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 AKAP8O43823 692 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 MRPL33O75394 65 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 TNFSF13O75888 250 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 BAG2O95816 211 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 GASTP01350 101 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 HLA-DOBP13765 273 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 POU2F1P14859 743 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 UQCRC1P31930 480 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 RPL4P36578 427 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 GSSP48637 474 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 CLDN17P56750 224 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 PRPS1P60891 318 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 RPS4XP62701 263 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 RPL18Q07020 188 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 ZP4Q12836 540 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 TSPAN31Q12999 210 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 ZBED5Q49AG3 693 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 ALG10Q5BKT4 473 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 ZNF770Q6IQ21 691 aaPredicted RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 XKRXQ6PP77 449 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 CASP12Q6UXS9 341 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 CREB3L2Q70SY1 520 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 NUFIP2Q7Z417 695 aaKnown RBP8.89□□□□□ -0.99
NUP54-203ENST00000504173 BTLAQ7Z6A9 289 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 PXKQ7Z7A4 578 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 HIPK1Q86Z02 1210 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 EPHX4Q8IUS5 362 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 LIX1LQ8IVB5 337 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 ZNF100Q8IYN0 542 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 HS3ST5Q8IZT8 346 aa8.89□□□□□ -0.99
NUP54-203ENST00000504173 ATG16L2Q8NAA4 619 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms