RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 ZNF275Q9NSD4 429 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-203ENST00000503274 AIPL1Q9NZN9 384 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 LHX3Q9UBR4 397 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 PCSK1NQ9UHG2 260 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 LCMT1Q9UIC8 334 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 MOSPD1Q9UJG1 213 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 APPL1Q9UKG1 709 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 DNPEPQ9ULA0 475 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 NEU3Q9UQ49 428 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 RNF115Q9Y4L5 304 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 U3KQA8 63 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 NAV2Q8IVL1 2488 aa4.2□□□□□ -1.74
NIPBL-203ENST00000503274 COL12A1Q99715 3063 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 A0A0J9YVX5 310 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 D6RAR5 112 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 K7ENP7 123 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 PSMD11O00231 422 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 NVLO15381 856 aaKnown RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 NUDT21O43809 227 aaKnown RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 KERAO60938 352 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 WNT2P09544 360 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 GDF1P27539 372 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 CD82P27701 267 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 SSR1P43307 286 aaKnown RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 ARHGDIBP52566 201 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 CCL7P80098 99 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 ZNF33BQ06732 778 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 CCDC122Q5T0U0 273 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 ARMC12Q5T9G4 340 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 PNCKQ6P2M8 343 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 C2orf66Q6UXQ4 117 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 YRDCQ86U90 279 aaKnown RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 ATPAF2Q8N5M1 289 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 ZNF525Q8N782 197 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 Q8N9G6 341 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 OR52J3Q8NH60 311 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 PDCD6IPQ8WUM4 868 aaKnown RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 LHX4Q969G2 390 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 TMEM45BQ96B21 275 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 ECHDC3Q96DC8 303 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 NUS1Q96E22 293 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 CCNL2Q96S94 520 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 PAXXQ9BUH6 204 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 SNRNP25Q9BV90 132 aaKnown RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 DDX47Q9H0S4 455 aaKnown RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 TCEAL2Q9H3H9 227 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-203ENST00000503274 LRRN3Q9H3W5 708 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 HAUS4Q9H6D7 363 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 PDFQ9HBH1 243 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 GPATCH2LQ9NWQ4 482 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 TRIM10Q9UDY6 481 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 HECTD1Q9ULT8 2610 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 LRRK2Q5S007 2527 aa4.19□□□□□ -1.74
NIPBL-203ENST00000503274 A8MX80 341 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 GOLGA6L19H0YKK7 550 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 J3QKU1 62 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 LY6G6DO95868 133 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 KRT7P08729 469 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 TPM1P09493 284 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 LIPCP11150 499 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 CCNB1P14635 433 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 ZNF30P17039 623 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 TEAD1P28347 426 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 UGT1A5P35504 534 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 GPR1P46091 355 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 RAG2P55895 527 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 RPL26P61254 145 aaKnown RBP4.18□□□□□ -1.74
NIPBL-203ENST00000503274 NDPQ00604 133 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 OGDHQ02218 1023 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 SLC10A7Q0GE19 358 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 BNIP1Q12981 228 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 DPYSQ14117 519 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 DPYSL2Q16555 572 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 CARTPTQ16568 116 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 TPRG1LQ5T0D9 272 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 SPECC1LQ69YQ0 1117 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 RAET1GQ6H3X3 334 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 DPY19L2P2Q6ZN68 376 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 ZNF571Q7Z3V5 609 aaPredicted RBP4.18□□□□□ -1.74
NIPBL-203ENST00000503274 TMEM185AQ8NFB2 350 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 OR1E3Q8WZA6 343 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 MED8Q96G25 268 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 PDXPQ96GD0 296 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 SPATA13Q96N96 652 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 YTHDF1Q9BYJ9 559 aaKnown RBP4.18□□□□□ -1.74
NIPBL-203ENST00000503274 POLR1EQ9GZS1 481 aaKnown RBP4.18□□□□□ -1.74
NIPBL-203ENST00000503274 HOMER3Q9NSC5 361 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 STARD5Q9NSY2 213 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 ZNHIT6Q9NWK9 470 aaKnown RBP4.18□□□□□ -1.74
NIPBL-203ENST00000503274 PISDQ9UG56 409 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 MIOXQ9UGB7 285 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 RPL26L1Q9UNX3 145 aaKnown RBP4.18□□□□□ -1.74
NIPBL-203ENST00000503274 NTNG1Q9Y2I2 539 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 NBASA2RRP1 2371 aa4.18□□□□□ -1.74
NIPBL-203ENST00000503274 IGHV3-35A0A0C4DH35 117 aa4.17□□□□□ -1.74
NIPBL-203ENST00000503274 RGSL1A5PLK6 1076 aa4.17□□□□□ -1.74
NIPBL-203ENST00000503274 MFSD2BA6NFX1 497 aa4.17□□□□□ -1.74
NIPBL-203ENST00000503274 OR5K4A6NMS3 321 aa4.17□□□□□ -1.74
NIPBL-203ENST00000503274 PDLIM1O00151 329 aa4.17□□□□□ -1.74
NIPBL-203ENST00000503274 PRB1P04280 392 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms