RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CLDN22Q8N7P3 220 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 NAXEQ8NCW5 288 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF570Q96NI8 536 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 ZFP3Q96NJ6 502 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF385AQ96PM9 386 aaKnown RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 DMRTA2Q96SC8 542 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 TACO1Q9BSH4 297 aaKnown RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 SF3B5Q9BWJ5 86 aaKnown RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 VCXQ9H320 206 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 BCO1Q9HAY6 547 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 GLRX2Q9NS18 164 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 USE1Q9NZ43 259 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 TMEFF2Q9UIK5 374 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 NOSIPQ9Y314 301 aaKnown RBP12.07□□□□□ -0.48
CPNE1-227ENST00000498056 ADAM18Q9Y3Q7 739 aa12.07□□□□□ -0.48
CPNE1-227ENST00000498056 IGKV3D-15A0A087WSY6 115 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 TEX13CA0A0J9YWL9 993 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 GPR171O14626 319 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 TP53P04637 393 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-227ENST00000498056 OSMP13725 252 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 IFNGR1P15260 489 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 RPS6KA3P51812 740 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 BIDP55957 195 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 ERVK-25P63136 954 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 ZP4Q12836 540 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 COX10Q12887 443 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 FOXF2Q12947 444 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 PDK3Q15120 406 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 C4orf17Q53FE4 359 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 RIPPLY2Q5TAB7 128 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 CARD17Q5XLA6 110 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 TMEM211Q6ICI0 200 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 NIPAL3Q6P499 406 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 VWA1Q6PCB0 445 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 CD300LDQ6UXZ3 194 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 CREB3L2Q70SY1 520 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 PARP8Q8N3A8 854 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 IQCF1Q8N6M8 205 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 LRRC75AQ8NAA5 344 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 RND1Q92730 232 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 RASD2Q96D21 266 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 TSPAN32Q96QS1 320 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 SLC29A1Q99808 456 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 TSSK6Q9BXA6 273 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 REV1Q9UBZ9 1251 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 ENOPH1Q9UHY7 261 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 ING1Q9UK53 422 aaPredicted RBP12.06□□□□□ -0.48
CPNE1-227ENST00000498056 ALPK2Q86TB3 2170 aa12.06□□□□□ -0.48
CPNE1-227ENST00000498056 A0A0G2JNJ9 132 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 A0A1B0GUH1 482 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 ZNF724A8MTY0 619 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 LRRTM2O43300 516 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 IGHMP01871 453 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 YES1P07947 543 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 TSPAN19P0C672 248 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 NOS3P29474 1203 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 RAD23AP54725 363 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 KRR1Q13601 381 aaKnown RBP12.05□□□□□ -0.48
CPNE1-227ENST00000498056 ACKR1Q16570 336 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 PGGHGQ32M88 737 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 RFX4Q33E94 735 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 ZIK1Q3SY52 487 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-227ENST00000498056 FAM214BQ7L5A3 538 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 AAED1Q7RTV5 226 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 OR2T33Q8NG76 320 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 OR6K3Q8NGY3 331 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 ASB10Q8WXI3 467 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 CCDC120Q96HB5 630 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 TXNDC15Q96J42 360 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 ERMAPQ96PL5 475 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-227ENST00000498056 GPX7Q96SL4 187 aaPredicted RBP12.05□□□□□ -0.48
CPNE1-227ENST00000498056 EMC6Q9BV81 110 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 GABARAPL3Q9BY60 117 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 ENKD1Q9H0I2 346 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 VCX3BQ9H321 246 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 GP6Q9HCN6 339 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 FANCFQ9NPI8 374 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 GRHPRQ9UBQ7 328 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 Q9UFV3 132 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 IER3IP1Q9Y5U9 82 aa12.05□□□□□ -0.48
CPNE1-227ENST00000498056 HCFC1P51610 2035 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 HSPB2A8KAH6 182 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 EEF1E1-BLOC1S5C9J1V9 151 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 H7C1C5 153 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 EEF1E1O43324 174 aaKnown RBP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 PTP4A3O75365 173 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 SMNDC1O75940 238 aaKnown RBP eCLIP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 BCL10O95999 233 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 IGHV3-9P01782 118 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 CD14P08571 375 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 BMP5P22003 454 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 CEACAM8P31997 349 aaPredicted RBP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 ACVR1BP36896 505 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 SELENOPP49908 381 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 RPL27P61353 136 aaKnown RBP12.04□□□□□ -0.48
CPNE1-227ENST00000498056 LCN6P62502 163 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 GUSBP1Q15486 140 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 HSPB2Q16082 182 aa12.04□□□□□ -0.48
CPNE1-227ENST00000498056 MTFR2Q6P444 385 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms