RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 NANOS3P60323 173 aaKnown RBP10.05□□□□□ -0.8
CMSS1-208ENST00000496116 CDK10Q15131 360 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 HSPB2Q16082 182 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 NTRK2Q16620 822 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 POMZP3Q6PJE2 187 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 UTS2BQ765I0 119 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 CDC20BQ86Y33 519 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 PLPP5Q8NEB5 264 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 OR5AK2Q8NH90 309 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF501Q96CX3 271 aaPredicted RBP10.05□□□□□ -0.8
CMSS1-208ENST00000496116 KLHL15Q96M94 604 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 RTN4RQ9BZR6 473 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 FAM117AQ9C073 453 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 DPAGT1Q9H3H5 408 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 WDR76Q9H967 626 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF346Q9UL40 294 aaKnown RBP10.05□□□□□ -0.8
CMSS1-208ENST00000496116 SRPK3Q9UPE1 567 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 UNC13CQ8NB66 2214 aa10.05□□□□□ -0.8
CMSS1-208ENST00000496116 A0A1B0GTQ1 180 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ACOD1A6NK06 481 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 C4orf47A7E2U8 309 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 IDSB3KWA1 339 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 H7C1C5 153 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 AIPO00170 330 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 KHNYNO15037 678 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 RPP14O95059 124 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 DHFRP00374 187 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 BGLAPP02818 100 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 OR8G3PP0DMU2 310 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 EVI2BP34910 448 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 POLR2HP52434 150 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 EFNA3P52797 238 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 RRAS2P62070 204 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 LCN6P62502 163 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 EGR3Q06889 387 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ALKBH1Q13686 389 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 Q499Y3 187 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 PLA1AQ53H76 456 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 LIPNQ5VXI9 398 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 OR6V1Q8N148 313 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 SIX5Q8N196 739 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 SLC25A45Q8N413 288 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 OR4D9Q8NGE8 314 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 OR6N2Q8NGY6 317 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 LGALS14Q8TCE9 139 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 METTL21AQ8WXB1 218 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 AKAP1Q92667 903 aaKnown RBP eCLIP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF524Q96C55 264 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ZFP3Q96NJ6 502 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 DERL3Q96Q80 235 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 GFM1Q96RP9 751 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 C7orf50Q9BRJ6 194 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 BEX2Q9BXY8 128 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 SYT4Q9H2B2 425 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF768Q9H5H4 540 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 TCF7L1Q9HCS4 588 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 AKAP7Q9P0M2 348 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 COPZ2Q9P299 210 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 IKZF2Q9UKS7 526 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 MRPS7Q9Y2R9 242 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 EML5Q05BV3 1969 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 A0A0B4J203 849 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 IFITM5A6NNB3 132 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 DCTN6O00399 190 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 CTDSPLO15194 276 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 TOX3O15405 576 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ARHGEF9O43307 516 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 UPK3AO75631 287 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF432O94892 652 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ARRB1P49407 418 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 SRP9P49458 86 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 TOMM34Q15785 309 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 SGCBQ16585 318 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 SLC36A2Q495M3 483 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 FAM69AQ5T7M9 428 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 EEF1A1P5Q5VTE0 462 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 GRINAQ7Z429 371 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF433Q8N7K0 673 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 ZNF441Q8N8Z8 693 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 YIPF5Q969M3 257 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 INTS14Q96SY0 518 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 COMMD4Q9H0A8 199 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 DUSP15Q9H1R2 295 aaPredicted RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 TAS2R5Q9NYW4 299 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 MRM2Q9UI43 246 aaKnown RBP10.04□□□□□ -0.8
CMSS1-208ENST00000496116 V9GY05 133 aa10.04□□□□□ -0.8
CMSS1-208ENST00000496116 RP1P56715 2156 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TRIOO75962 3097 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 TVP23AA6NH52 213 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 OR6C70A6NIJ9 312 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 A8MVM7 634 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 PRR32B1ATL7 298 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 PIN1P1O15428 100 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 GSTZ1O43708 216 aaPredicted RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 SCO2O43819 266 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 SUSD5O60279 629 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 CD3GP09693 182 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 ERP29P30040 261 aaKnown RBP10.03□□□□□ -0.8
CMSS1-208ENST00000496116 CENPAP49450 140 aa10.03□□□□□ -0.8
CMSS1-208ENST00000496116 AGFG1P52594 562 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms