RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 ERVK-25P63136 954 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 SNCBQ16143 134 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 ACKR1Q16570 336 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 ZIK1Q3SY52 487 aaPredicted RBP17.32■□□□□ 0.36
ATG3-208ENST00000495756 EEF1A1P5Q5VTE0 462 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 TUSC5Q8IXB3 177 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 ZIC4Q8N9L1 334 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 ZNF775Q96BV0 537 aaPredicted RBP17.32■□□□□ 0.36
ATG3-208ENST00000495756 GMPPAQ96IJ6 420 aaPredicted RBP17.32■□□□□ 0.36
ATG3-208ENST00000495756 RDH12Q96NR8 316 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 VKORC1Q9BQB6 163 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 POLDIP3Q9BY77 421 aaKnown RBP17.32■□□□□ 0.36
ATG3-208ENST00000495756 RASSF4Q9H2L5 321 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 RIBC2Q9H4K1 309 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 NRIP3Q9NQ35 241 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 SMPD3Q9NY59 655 aaPredicted RBP17.32■□□□□ 0.36
ATG3-208ENST00000495756 EMC3Q9P0I2 261 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 ADAM18Q9Y3Q7 739 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 ESPL1Q14674 2120 aa17.32■□□□□ 0.36
ATG3-208ENST00000495756 NPIPB13A6NJU9 1138 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 NPIPB4C9JG80 1138 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 DLGAP1O14490 977 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 BHLHE40O14503 412 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 SS18L1O75177 396 aaPredicted RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 PPP1R3DO95685 299 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 SNAP29O95721 258 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 YES1P07947 543 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 POLR2IP36954 125 aaKnown RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 NPRL3Q12980 569 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 SLC35D2Q76EJ3 337 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 GCNT2Q8N0V5 402 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 MARVELD2Q8N4S9 558 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 OR2T33Q8NG76 320 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 INTS12Q96CB8 462 aaKnown RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 TXNDC15Q96J42 360 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 ZNF385AQ96PM9 386 aaKnown RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 DMRTA2Q96SC8 542 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 MBOAT4Q96T53 435 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 TXNIPQ9H3M7 391 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 TOR3AQ9H497 397 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 MED29Q9NX70 200 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 MEMO1Q9Y316 297 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 IL2RAP01589 272 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 IGHMP01871 453 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 APEHP13798 732 aaKnown RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 CEACAM8P31997 349 aaPredicted RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 UQCRFS1P47985 274 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 GIPRP48546 466 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 DAP3P51398 398 aaKnown RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 PER3P56645 1201 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 CLDN17P56750 224 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 PMPCAQ10713 525 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 TOP3AQ13472 1001 aaPredicted RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 GINS1Q14691 196 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 PTGES3Q15185 160 aaKnown RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 GUSBP1Q15486 140 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 EIF2S3LQ2VIR3 472 aaKnown RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 SLC27A4Q6P1M0 643 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 FAM122BQ7Z309 247 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 IQCF1Q8N6M8 205 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 OR4Q3Q8NH05 313 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 ZNF570Q96NI8 536 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 ZFP3Q96NJ6 502 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 TSPAN32Q96QS1 320 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 TACO1Q9BSH4 297 aaKnown RBP17.31■□□□□ 0.36
ATG3-208ENST00000495756 IER3IP1Q9Y5U9 82 aa17.31■□□□□ 0.36
ATG3-208ENST00000495756 ALPK2Q86TB3 2170 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 ARPC3O15145 178 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 BCL10O95999 233 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 AGTR1P30556 359 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 NTF4P34130 210 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 VHLP40337 213 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 RPS6KA3P51812 740 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 RPL27P61353 136 aaKnown RBP17.3■□□□□ 0.36
ATG3-208ENST00000495756 CDK5Q00535 292 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 TMEM201Q5SNT2 666 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 ARMC4Q5T2S8 1044 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 GPR139Q6DWJ6 353 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 LNX2Q8N448 690 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 ASB10Q8WXI3 467 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 Q96M85 177 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 ERMAPQ96PL5 475 aaPredicted RBP17.3■□□□□ 0.36
ATG3-208ENST00000495756 GRIP2Q9C0E4 1043 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 SLC25A19Q9HC21 320 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 GRHPRQ9UBQ7 328 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 ZNF346Q9UL40 294 aaKnown RBP17.3■□□□□ 0.36
ATG3-208ENST00000495756 BAIAP2Q9UQB8 552 aa17.3■□□□□ 0.36
ATG3-208ENST00000495756 ZAR1LA6NP61 321 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 H0YJX3 145 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 CCL21O00585 134 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 CRHP06850 196 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 TMIGD3P0DMS9 266 aaPredicted RBP17.29■□□□□ 0.36
ATG3-208ENST00000495756 SMSP52788 366 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 BIDP55957 195 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 FOXF2Q12947 444 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 MELKQ14680 651 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 PGGHGQ32M88 737 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 RIPPLY2Q5TAB7 128 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 TMEM236Q5W0B7 351 aa17.29■□□□□ 0.36
ATG3-208ENST00000495756 TMEM211Q6ICI0 200 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms