RNA–Protein interactions for RNA: ENST00000494980.5

CHMP2B-205, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 3 BASIC

Gene CHMP2B, Length 1,175 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-205ENST00000494980 USH1CQ9Y6N9 552 aa12.09□□□□□ -0.47
CHMP2B-205ENST00000494980 ZC3H12DA2A288 527 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 TM9SF1O15321 606 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 PDPK1O15530 556 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 SLC43A1O75387 559 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 CSTAP01040 98 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 TSPAN8P19075 237 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 EFNB2P52799 333 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 EMX1Q04741 257 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 DCTN2Q13561 401 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 LASP1Q14847 261 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 ZMYND11Q15326 602 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 NKAPLQ5M9Q1 402 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 NOXRED1Q6NXP6 359 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 ZCCHC12Q6PEW1 402 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 MUC20Q8N307 709 aaPredicted RBP12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 CPEB3Q8NE35 698 aaKnown RBP12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 DDIT4LQ96D03 193 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 MAP6Q96JE9 813 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 DPH5Q9H2P9 285 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 DPAGT1Q9H3H5 408 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 PIGUQ9H490 435 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 PCDHGB4Q9UN71 923 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 RCE1Q9Y256 329 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 ABCA13Q86UQ4 5058 aa12.08□□□□□ -0.48
CHMP2B-205ENST00000494980 CENPVL1A0A0U1RR11 272 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 TMEM72A0PK05 275 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 URI1O94763 535 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 RAB36O95755 333 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 OTCP00480 354 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 UQCRC2P22695 453 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 RYKP34925 604 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 TGFBR2P37173 567 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 ETV4P43268 484 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 GIPRP48546 466 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 BTG1P62324 171 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 CEACAM7Q14002 265 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 OR7A5Q15622 319 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 SPRNQ5BIV9 151 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 TMEM225Q6GV28 225 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 ANKRD26P1Q6NSI1 321 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 FRRS1Q6ZNA5 592 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 C1orf122Q6ZSJ8 110 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 LRRC28Q86X40 367 aaPredicted RBP12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 EPHX4Q8IUS5 362 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 DDIASQ8IXT1 998 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 WFDC9Q8NEX5 89 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 SPATA4Q8NEY3 305 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 GATAD2BQ8WXI9 593 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 THOC1Q96FV9 657 aaKnown RBP12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 PCGF1Q9BSM1 259 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 EGLN1Q9GZT9 426 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 RAB17Q9H0T7 212 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 VPREB3Q9UKI3 123 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 TMCO1Q9UM00 188 aa12.07□□□□□ -0.48
CHMP2B-205ENST00000494980 TMED7-TICAM2A0A0A6YYA0 188 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 A0A0U1RQK1 487 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 KIR2DS1A0A191URI9 304 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 CEACAM18A8MTB9 384 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 ZNF99A8MXY4 864 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 RAD51CO43502 376 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 ZNF500O60304 480 aaPredicted RBP12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 OR4F21O95013 312 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 HMGN2P05204 90 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 LCKP06239 509 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 DRD4P21917 467 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 MAGEA4P43358 317 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 PLTPP55058 493 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 ZNF774Q6NX45 483 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 GPR137CQ8N3F9 429 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 ICA1LQ8NDH6 482 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 C11orf40Q8WZ69 217 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 NUDT16L1Q9BRJ7 211 aaKnown RBP12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 ZNF225Q9UK10 706 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 TMED7Q9Y3B3 224 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 KCNE3Q9Y6H6 103 aa12.06□□□□□ -0.48
CHMP2B-205ENST00000494980 CENPVL3A0A0U1RRI6 287 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 ANKRD61A6NGH8 418 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 LIPT2A6NK58 231 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 BCAS1O75363 584 aaPredicted RBP12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 KLHL2O95198 593 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 KRT6AP02538 564 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 KRT6BP04259 564 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 C2P06681 752 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 GPIP06744 558 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 VSIG10L2P0DP72 767 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 KRT6CP48668 564 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 HTR6P50406 440 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 P2RY4P51582 365 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 EGFEM1PQ0D2K5 195 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 PDE7AQ13946 482 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 RAB39AQ14964 217 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 RASA2Q15283 850 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 PAQR4Q8N4S7 273 aaPredicted RBP12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 Q8NFD4 153 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 ZFP28Q8NHY6 868 aa12.05□□□□□ -0.48
CHMP2B-205ENST00000494980 ZNF519Q8TB69 540 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms