RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 BHLHA15Q7RTS1 189 aaPredicted RBP11.01□□□□□ -0.65
TRA2A-209ENST00000494255 HDDC2Q7Z4H3 204 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 MEX3DQ86XN8 651 aaKnown RBP11.01□□□□□ -0.65
TRA2A-209ENST00000494255 FAM46AQ96IP4 442 aaKnown RBP11.01□□□□□ -0.65
TRA2A-209ENST00000494255 ADAD1Q96M93 576 aaKnown RBP11.01□□□□□ -0.65
TRA2A-209ENST00000494255 OR2M2Q96R28 347 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 FUZQ9BT04 418 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 OR10A4Q9H209 315 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 REEP1Q9H902 201 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 MCCC2Q9HCC0 563 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 INIPQ9NRY2 104 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 MED29Q9NX70 200 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 TAS2R16Q9NYV7 291 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 CRIM1Q9NZV1 1036 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 SLC35F4A4IF30 521 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 MCIDASD6RGH6 385 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 ZNF587BE7ETH6 402 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 GNGT2O14610 69 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 LYZL6O75951 148 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 BCL10O95999 233 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 CST1P01037 141 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 F13BP05160 661 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 IFNGR1P15260 489 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 IGHV1-2P23083 117 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 DNAJA1P31689 397 aaKnown RBP11.01□□□□□ -0.65
TRA2A-209ENST00000494255 CCKARP32238 428 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 BIDP55957 195 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 PRPS1P60891 318 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 TGFBR3Q03167 851 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 ZBED5Q49AG3 693 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 ALG10Q5BKT4 473 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 CARD17Q5XLA6 110 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 ANKRD34AQ69YU3 496 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 GPR137CQ8N3F9 429 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 LINC00471Q8N535 108 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 OR13C2Q8NGS9 318 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 OR51A7Q8NH64 312 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 MOSPD2Q8NHP6 518 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 TXNDC15Q96J42 360 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 DACH2Q96NX9 599 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 USB1Q9BQ65 265 aaKnown RBP11.01□□□□□ -0.65
TRA2A-209ENST00000494255 EMC6Q9BV81 110 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 LINC00470Q9BZP3 86 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 ACTR6Q9GZN1 396 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 B3GAT2Q9NPZ5 323 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 HIF3AQ9Y2N7 669 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 SAMHD1Q9Y3Z3 626 aaKnown RBP11.01□□□□□ -0.65
TRA2A-209ENST00000494255 LYVE1Q9Y5Y7 322 aa11.01□□□□□ -0.65
TRA2A-209ENST00000494255 TRAV27A0A087WT01 109 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 CDC42EP2O14613 210 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 CLOCKO15516 846 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 FKBP6O75344 327 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 ZNF432O94892 652 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 TSPAN19P0C672 248 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 EPXP11678 715 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 COX5AP20674 150 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 MPGP29372 298 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 OMPP47874 163 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 DAP3P51398 398 aaKnown RBP11□□□□□ -0.65
TRA2A-209ENST00000494255 HMGA2P52926 109 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 RPS4XP62701 263 aaKnown RBP11□□□□□ -0.65
TRA2A-209ENST00000494255 CAMK2DQ13557 499 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 GK3PQ14409 553 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 LAPTM4AQ15012 233 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 TSC22D1Q15714 1073 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 HMBOX1Q6NT76 420 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 NHLRC1Q6VVB1 395 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 ZNF433Q8N7K0 673 aaPredicted RBP11□□□□□ -0.65
TRA2A-209ENST00000494255 OR6N1Q8NGY5 312 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 OR6X1Q8NH79 312 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 WFIKKN1Q96NZ8 548 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 TNFRSF13CQ96RJ3 184 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 ZNF226Q9NYT6 803 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 STX18Q9P2W9 335 aaKnown RBP11□□□□□ -0.65
TRA2A-209ENST00000494255 COL12A1Q99715 3063 aa11□□□□□ -0.65
TRA2A-209ENST00000494255 UNC119BA6NIH7 251 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 RAD51DO75771 328 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 CCNB2O95067 398 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 SSTR2P30874 369 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 RPL4P36578 427 aaKnown RBP10.99□□□□□ -0.65
TRA2A-209ENST00000494255 LIMS1P48059 325 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 ROR2Q01974 943 aaKnown RBP10.99□□□□□ -0.65
TRA2A-209ENST00000494255 LGALS3BPQ08380 585 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 MELKQ14680 651 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 C9orf135Q5VTT2 229 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 OR7E24Q6IFN5 339 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 TMEM123Q8N131 208 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 PAPD5Q8NDF8 572 aaKnown RBP10.99□□□□□ -0.65
TRA2A-209ENST00000494255 GNPDA2Q8TDQ7 276 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 S100PBPQ96BU1 408 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 ZC3HAV1LQ96H79 300 aaKnown RBP10.99□□□□□ -0.65
TRA2A-209ENST00000494255 LRR1Q96L50 414 aa10.99□□□□□ -0.65
TRA2A-209ENST00000494255 ALKBH3Q96Q83 286 aaPredicted RBP10.99□□□□□ -0.65
TRA2A-209ENST00000494255 CCM2LQ9NUG4 571 aaPredicted RBP10.99□□□□□ -0.65
TRA2A-209ENST00000494255 M0R3G1 203 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 UPK3AO75631 287 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 IGHG1P01857 330 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 ITGA5P08648 1049 aa10.98□□□□□ -0.65
TRA2A-209ENST00000494255 CDH2P19022 906 aaPredicted RBP10.98□□□□□ -0.65
TRA2A-209ENST00000494255 CSNK1A1P48729 337 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 142.2 ms