RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 C11orf70Q9BRQ4 267 aa4.5□□□□□ -1.69
SMC2-205ENST00000493955 GBA3Q9H227 469 aa4.5□□□□□ -1.69
SMC2-205ENST00000493955 TMEM9Q9P0T7 183 aa4.5□□□□□ -1.69
SMC2-205ENST00000493955 PITPNC1Q9UKF7 332 aa4.5□□□□□ -1.69
SMC2-205ENST00000493955 NUP153P49790 1475 aaKnown RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 GOLGA3Q08378 1498 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 STRCQ7RTU9 1775 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 GOSR2O14653 212 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 CASQ2O14958 399 aaPredicted RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 DNAJB6O75190 326 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 ZNF780AO75290 641 aaPredicted RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 CTAG2O75638 210 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 C2P06681 752 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 PRDX3P30048 256 aaKnown RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 GLP1RP43220 463 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 TNNT2P45379 298 aaPredicted RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 C21orf59P57076 290 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 RGS8P57771 180 aaPredicted RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 FBXW4P57775 412 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 DSCR10P59022 87 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 ZNF763Q0D2J5 394 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 ALKBH6Q3KRA9 238 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 C1orf100Q5SVJ3 147 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 TRIM40Q6P9F5 258 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 P2RY8Q86VZ1 359 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 PIANPQ8IYJ0 282 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 SLC22A8Q8TCC7 542 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 TSEN15Q8WW01 171 aaKnown RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 STARD8Q92502 1023 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 HSFY1Q96LI6 401 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 ZNF578Q96N58 590 aaPredicted RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 TGS1Q96RS0 853 aaKnown RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 SORT1Q99523 831 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 ARHGDIGQ99819 225 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 GEMIN7Q9H840 131 aaKnown RBP4.49□□□□□ -1.69
SMC2-205ENST00000493955 LY9Q9HBG7 655 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 SH2D2AQ9NP31 389 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 GCNT4Q9P109 453 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMC2-205ENST00000493955 CDHR2Q9BYE9 1310 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 FANCIQ9NVI1 1328 aa4.49□□□□□ -1.69
SMC2-205ENST00000493955 YEATS2Q9ULM3 1422 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 TRBV11-1A0A0K0K1C0 115 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 PHOX2AO14813 284 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 SOX15O60248 233 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 ERLIN2O94905 339 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 H6PDO95479 791 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 ZNF24P17028 368 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 CMA1P23946 247 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 ATP5C1P36542 298 aaKnown RBP4.48□□□□□ -1.69
SMC2-205ENST00000493955 ARRB1P49407 418 aaPredicted RBP4.48□□□□□ -1.69
SMC2-205ENST00000493955 ERVK-25P63136 954 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 MERTKQ12866 999 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 IL18Q14116 193 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 C1orf94Q6P1W5 598 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 SASS6Q6UVJ0 657 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 LUZP2Q86TE4 346 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 PYGO2Q9BRQ0 406 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 C20orf24Q9BUV8 137 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 TMEM59Q9BXS4 323 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 SLC7A10Q9NS82 523 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 ASF1AQ9Y294 204 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 PREX1Q8TCU6 1659 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 CDK13Q14004 1512 aaKnown RBP4.48□□□□□ -1.69
SMC2-205ENST00000493955 ZMYM4Q5VZL5 1548 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 HECW1Q76N89 1606 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 NEO1Q92859 1461 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 FHOD3Q2V2M9 1422 aa4.48□□□□□ -1.69
SMC2-205ENST00000493955 IGLV3-22A0A075B6J6 115 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 RBMY1BA6NDE4 496 aaKnown RBP4.47□□□□□ -1.69
SMC2-205ENST00000493955 RBMY1EA6NEQ0 496 aaKnown RBP4.47□□□□□ -1.69
SMC2-205ENST00000493955 EPOPA6NHQ4 379 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 ZFP92A6NM28 416 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 CCL21O00585 134 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 DLGAP1O14490 977 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 CLOCKO15516 846 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 OR2J3O76001 311 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 TIMP1P01033 207 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 IGHV2-5P01817 119 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 RBMY1DP0C7P1 496 aaKnown RBP4.47□□□□□ -1.69
SMC2-205ENST00000493955 RBMY1A1P0DJD3 496 aaKnown RBP4.47□□□□□ -1.69
SMC2-205ENST00000493955 SLC2A5P22732 501 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 IGLV3-21P80748 117 aaPredicted RBP4.47□□□□□ -1.69
SMC2-205ENST00000493955 MRPS22P82650 360 aaKnown RBP4.47□□□□□ -1.69
SMC2-205ENST00000493955 TGFBR3Q03167 851 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 ATP6AP1Q15904 470 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 TMIGD1Q6UXZ0 262 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 Q6ZR54 194 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 EIF3MQ7L2H7 374 aaKnown RBP4.47□□□□□ -1.69
SMC2-205ENST00000493955 OFCC1Q8IZS5 231 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 MS4A15Q8N5U1 240 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 C14orf178Q8N769 122 aaPredicted RBP4.47□□□□□ -1.69
SMC2-205ENST00000493955 NKAPP1Q8N9T2 125 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 SPATA3Q8NHX4 192 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 ACMSDQ8TDX5 336 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 KIFAP3Q92845 792 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 SMARCD2Q92925 531 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 TSG101Q99816 390 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 SH3GL1Q99961 368 aa4.47□□□□□ -1.69
SMC2-205ENST00000493955 POLR2J2Q9GZM3 115 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms