RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 HIF3AQ9Y2N7 669 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 TSPAN19P0C672 248 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 FASP25445 335 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 IFNGR2P38484 337 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 ALG10Q5BKT4 473 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 ANKRD34AQ69YU3 496 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 SLC35D2Q76EJ3 337 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 ANKK1Q8NFD2 765 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 GIPC3Q8TF64 312 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 TMEM45BQ96B21 275 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 NPDC1Q9NQX5 325 aaPredicted RBP15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 INIPQ9NRY2 104 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 SIGLEC7Q9Y286 467 aa15.82■□□□□ 0.12
PDLIM7-208ENST00000493815 USP9YO00507 2555 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 SPTAN1Q13813 2472 aaKnown RBP15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 FREM1Q5H8C1 2179 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 CACNA1CQ13936 2221 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 SLC35F4A4IF30 521 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 PTP4A3O75365 173 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 FPR3P25089 353 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 SLC9A3P48764 834 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 BIDP55957 195 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 FXYD6P3P58550 94 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 FAM27E3Q08E93 113 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 TOP3AQ13472 1001 aaPredicted RBP15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 TSPO2Q5TGU0 170 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 THSD4Q6ZMP0 1018 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 STK32CQ86UX6 486 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 GNPDA2Q8TDQ7 276 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 FEVQ99581 238 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 NIPSNAP1Q9BPW8 284 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 FANCFQ9NPI8 374 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 SLC7A10Q9NS82 523 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 PARPBPQ9NWS1 579 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 DOPEY2Q9Y3R5 2298 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 ALPK2Q86TB3 2170 aa15.81■□□□□ 0.12
PDLIM7-208ENST00000493815 MCIDASD6RGH6 385 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 PRSS44E7EML9 344 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 ZNF432O94892 652 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 GSSP48637 474 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 CAMK2DQ13557 499 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 TSC22D1Q15714 1073 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 ACKR1Q16570 336 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 LRRC75AQ8NAA5 344 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 PSMG3-AS1Q96PY0 264 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 OR2M2Q96R28 347 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 PKP2Q99959 881 aa15.8■□□□□ 0.12
PDLIM7-208ENST00000493815 A0A1W2PRG6 482 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 UPK3AO75631 287 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 ADAP00813 363 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 FCGR1AP12314 374 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 RPL4P36578 427 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 FOXG1P55316 489 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 CTXN1P60606 82 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 ERVK-25P63136 954 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 RUNX1T1Q06455 604 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 TSPAN31Q12999 210 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 C9orf135Q5VTT2 229 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 ZFP1Q6P2D0 407 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 LINC00471Q8N535 108 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 FANK1Q8TC84 345 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 EGLN3Q9H6Z9 239 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 S100A14Q9HCY8 104 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 ADAM18Q9Y3Q7 739 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 ICE1Q9Y2F5 2266 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 BCL10O95999 233 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 IGFBP1P08833 259 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 COL8A1P27658 744 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 PRPS1P60891 318 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 FAPQ12884 760 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 FBXL19-AS1Q494R0 122 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 FBXW9Q5XUX1 488 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 SHQ1Q6PI26 577 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 SMARCD3Q6STE5 483 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 BEND4Q6ZU67 534 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 CXorf67Q86X51 503 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 KIF18BQ86Y91 864 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 TMEM123Q8N131 208 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 GABRG1Q8N1C3 465 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 RNASE6Q93091 150 aaKnown RBP15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 ALKBH3Q96Q83 286 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 BDH2Q9BUT1 245 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 KATNB1Q9BVA0 655 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 SLCO5A1Q9H2Y9 848 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 RCE1Q9Y256 329 aa15.79■□□□□ 0.12
PDLIM7-208ENST00000493815 ZNF726A6NNF4 738 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 SOX14O95416 240 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 ZNF23P17027 643 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 PHYHD1Q5SRE7 291 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 Q6ZT83 130 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 LINGO2Q7L985 606 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 ICA1LQ8NDH6 482 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 SAMD8Q96LT4 415 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 TSPAN32Q96QS1 320 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 DGCR6LQ9BY27 220 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 POLDIP3Q9BY77 421 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 OR52D1Q9H346 318 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 UPB1Q9UBR1 384 aa15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 ZNF346Q9UL40 294 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-208ENST00000493815 MGAT4BQ9UQ53 548 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms