RNA–Protein interactions for RNA: ENST00000493507.5

CCNB3-208, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 340 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-208ENST00000493507 STX4Q12846 297 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 CHI3L2Q15782 390 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 INAQ16352 499 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 NTRK2Q16620 822 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 CCDC153Q494R4 210 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 ZNF672Q499Z4 452 aaPredicted RBP4.32□□□□□ -1.72
CCNB3-208ENST00000493507 CEP85LQ5SZL2 805 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 TTC19Q6DKK2 380 aaPredicted RBP4.32□□□□□ -1.72
CCNB3-208ENST00000493507 HIST2H2AA3Q6FI13 130 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 NOXRED1Q6NXP6 359 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 XKRXQ6PP77 449 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 TMEM107Q6UX40 140 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 HSDL2Q6YN16 418 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 ZNF704Q6ZNC4 412 aaPredicted RBP4.32□□□□□ -1.72
CCNB3-208ENST00000493507 RNF165Q6ZSG1 346 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 DOLPP1Q86YN1 238 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 SLC22A9Q8IVM8 553 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 RIMKLAQ8IXN7 391 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 CLECL1Q8IZS7 167 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 MUC20Q8N307 709 aaPredicted RBP4.32□□□□□ -1.72
CCNB3-208ENST00000493507 FBXW8Q8N3Y1 598 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 RIBC1Q8N443 379 aaPredicted RBP4.32□□□□□ -1.72
CCNB3-208ENST00000493507 ACBD4Q8NC06 268 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 OR7A2PQ8NGA2 310 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 OR5R1Q8NH85 324 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 RDH11Q8TC12 318 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 SPPL2AQ8TCT8 520 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 ZNF675Q8TD23 568 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 PAQR8Q8TEZ7 354 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 RIT1Q92963 219 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 TSSK3Q96PN8 268 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 ROGDIQ9GZN7 287 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 DEFB127Q9H1M4 99 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 UBQLN3Q9H347 655 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 FKRPQ9H9S5 495 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 FOLH1BQ9HBA9 442 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 TMBIM4Q9HC24 238 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 CHST11Q9NPF2 352 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 PNPLA3Q9NST1 481 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 VPS29Q9UBQ0 182 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 SEC14L3Q9UDX4 400 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 DCDC2Q9UHG0 476 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 NPIPA1Q9UND3 350 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 AKAP6Q13023 2319 aa4.32□□□□□ -1.72
CCNB3-208ENST00000493507 A0A1W2PS18 150 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TMEM120BA0PK00 339 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 H0YC42 278 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 UPK1AO00322 258 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 SMAD9O15198 467 aaKnown RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 OGG1O15527 345 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 SCN2BO60939 215 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 ICOSLGO75144 302 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 SNNO75324 88 aaPredicted RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TOXO94900 526 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 IGHG3P01860 377 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 KRT6AP02538 564 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 KRT6BP04259 564 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 ANXA4P09525 319 aaPredicted RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 UROSP10746 265 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 LAMP1P11279 417 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 HLA-DOBP13765 273 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 H2AFXP16104 143 aaPredicted RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 PORP16435 677 aaPredicted RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 ZNF24P17028 368 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 ANXA7P20073 488 aaKnown RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 KLK2P20151 261 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TCEA1P23193 301 aaKnown RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 PTPN6P29350 595 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 KRT6CP48668 564 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TRPC1P48995 793 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 CYB561P49447 251 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TPD52P55327 224 aaPredicted RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 CLDN15P56746 228 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 CLDN20P56880 219 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 B3GALT5-AS1P59052 145 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TFF3Q07654 80 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TGM3Q08188 693 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 ZNF763Q0D2J5 394 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 HSPB3Q12988 150 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 SERTAD2Q14140 314 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 MAPK11Q15759 364 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 CD226Q15762 336 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 NDUFAF6Q330K2 333 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 ZNF718Q3SXZ3 478 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 GTDC1Q4AE62 458 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 EIPR1Q53HC9 387 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 TMEM198Q66K66 360 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 NIPAL1Q6NVV3 410 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 MZT2BQ6NZ67 158 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 RTL4Q6ZR62 310 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 CCDC190Q86UF4 302 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 LCA5Q86VQ0 697 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 EPHX4Q8IUS5 362 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 C10orf111Q8N326 155 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 LRRC25Q8N386 305 aaPredicted RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 LIX1Q8N485 282 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 WDSUB1Q8N9V3 476 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 RELL2Q8NC24 303 aaPredicted RBP4.31□□□□□ -1.72
CCNB3-208ENST00000493507 OR4K14Q8NGD5 310 aa4.31□□□□□ -1.72
CCNB3-208ENST00000493507 OR5M9Q8NGP3 310 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms