RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 A0A1W2PRG6 482 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 TMEM8BA6NDV4 472 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 C11orf98E9PRG8 122 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 TNFSF11O14788 317 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 HTR1AP08908 422 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 DBTP11182 482 aaKnown RBP12.67□□□□□ -0.38
VPS26A-205ENST00000489656 ZNF708P17019 499 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 ZNF24P17028 368 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 SLC2A5P22732 501 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 AHCYP23526 432 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 ACVR2AP27037 513 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 HTR1FP30939 366 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 DAP3P51398 398 aaKnown RBP12.67□□□□□ -0.38
VPS26A-205ENST00000489656 NUDT6P53370 316 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 CDH15P55291 814 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 CLDN15P56746 228 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 CLDN18P56856 261 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 HSF1Q00613 529 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 ZNF91Q05481 1191 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 ACKR1Q16570 336 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 MESTQ5EB52 335 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 PDSS1Q5T2R2 415 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 ARMC4Q5T2S8 1044 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 HBMQ6B0K9 141 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 VASNQ6EMK4 673 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 PLBD1Q6P4A8 553 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 PRSS48Q7RTY5 328 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 BCDIN3DQ7Z5W3 292 aaKnown RBP12.67□□□□□ -0.38
VPS26A-205ENST00000489656 OR4K13Q8NH42 304 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 PTP4A1Q93096 173 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 MYDGFQ969H8 173 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 OXGR1Q96P68 337 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 LAMA5O15230 3695 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 MED12LQ86YW9 2145 aa12.67□□□□□ -0.38
VPS26A-205ENST00000489656 IRGMA1A4Y4 181 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 A6NIZ1 184 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 PTGES3LE9PB15 166 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 EIF1AYO14602 144 aaKnown RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 TFECO14948 347 aaPredicted RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 RGS10O43665 173 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 AHCYL1O43865 530 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 CDK1P06493 297 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 EEF1B2P24534 225 aaKnown RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 STARP49675 285 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 SLC25A1P53007 311 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 SUCLG1P53597 346 aaKnown RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 CDH11P55287 796 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 CARD18P57730 90 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 RAP1BP61224 184 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 RAP1AP62834 184 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 PMP22Q01453 160 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 MEPCEQ7L2J0 689 aaKnown RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 JAZF1Q86VZ6 243 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 EXD3Q8N9H8 876 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 SDR9C7Q8NEX9 313 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 BBS1Q8NFJ9 593 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 OR10D3Q8NH80 312 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 ASB10Q8WXI3 467 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 ZCCHC14Q8WYQ9 949 aaKnown RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 SGCDQ92629 289 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 ABTB1Q969K4 478 aaPredicted RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 RELTQ969Z4 430 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 ABHD17AQ96GS6 310 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 RHNO1Q9BSD3 238 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 COPS4Q9BT78 406 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 SRXN1Q9BYN0 137 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 AMBNQ9NP70 447 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 TIGARQ9NQ88 270 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 PAQR5Q9NXK6 330 aaPredicted RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 HAO2Q9NYQ3 351 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 H2AFY2Q9P0M6 372 aaPredicted RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 WARS2Q9UGM6 360 aaKnown RBP12.66□□□□□ -0.38
VPS26A-205ENST00000489656 TUBD1Q9UJT1 453 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 B3GNT3Q9Y2A9 372 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 PCDHGB1Q9Y5G3 927 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 LIPGQ9Y5X9 500 aa12.66□□□□□ -0.38
VPS26A-205ENST00000489656 TRGV5A0A0B4J1U4 118 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 A0A1B0GVC2 190 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 OR6C68A6NDL8 312 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 CCDC182A6NF36 153 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 SLC22A31A6NKX4 558 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 FAM183AA6NL82 134 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 EIF4E1BA6NMX2 242 aaKnown RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 ZNF814B7Z6K7 855 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 NPIPA5E9PKD4 350 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 K7EM74 188 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 SMAD9O15198 467 aaKnown RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 TRAF3IP2O43734 574 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 CLPTM1O96005 669 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 PLGP00747 810 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 HLA-DOBP13765 273 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 ENPP1P22413 925 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 ACVR1BP36896 505 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 CDKN2AP42771 156 aaKnown RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 MTNR1AP48039 350 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 CXADRP78310 365 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
VPS26A-205ENST00000489656 RAB40BQ12829 278 aa12.65□□□□□ -0.38
VPS26A-205ENST00000489656 KLHL22Q53GT1 634 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms