RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 HNRNPRO43390 633 aaKnown RBP13.37□□□□□ -0.27
FDPS-213ENST00000489003 SERPINI2O75830 405 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 F13BP05160 661 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 SAGP10523 405 aaPredicted RBP13.37□□□□□ -0.27
FDPS-213ENST00000489003 IFNGR1P15260 489 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 PSMB1P20618 241 aaKnown RBP13.37□□□□□ -0.27
FDPS-213ENST00000489003 SLC9A3P48764 834 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 LGALS3BPQ08380 585 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 ITGADQ13349 1161 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 C1orf146Q5VVC0 180 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 SLC35D2Q76EJ3 337 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 OAFQ86UD1 273 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 ZNF295-AS1Q8N0V1 137 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 LRRC75AQ8NAA5 344 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 LINC00470Q9BZP3 86 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 ASB6Q9NWX5 421 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 VNN3Q9NY84 501 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 CRIM1Q9NZV1 1036 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 NDRG3Q9UGV2 375 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 RCE1Q9Y256 329 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
FDPS-213ENST00000489003 TRAV27A0A087WT01 109 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 KLF4O43474 513 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 FKBP6O75344 327 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 EPXP11678 715 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 CCKARP32238 428 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 BIDP55957 195 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 CAMK2DQ13557 499 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 CCNIQ14094 377 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 ANKDD1AQ495B1 522 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 ZBED5Q49AG3 693 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 PHYHD1Q5SRE7 291 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 C1orf94Q6P1W5 598 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 TMEM123Q8N131 208 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 ZNF433Q8N7K0 673 aaPredicted RBP13.36□□□□□ -0.27
FDPS-213ENST00000489003 POMGNT2Q8NAT1 580 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 OR13C2Q8NGS9 318 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 FAM222BQ8WU58 562 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 OR2M2Q96R28 347 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 INIPQ9NRY2 104 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 MALT1Q9UDY8 824 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 CACNA1DQ01668 2161 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 PRR14LQ5THK1 2151 aa13.36□□□□□ -0.27
FDPS-213ENST00000489003 OR6C65A6NJZ3 312 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 CLOCKO15516 846 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 OR10H3O60404 316 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 SLC43A1O75387 559 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 CIB2O75838 187 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 LYZL6O75951 148 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 BCL10O95999 233 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 CST1P01037 141 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 ITGA5P08648 1049 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 ZNF26P17031 533 aaPredicted RBP13.35□□□□□ -0.27
FDPS-213ENST00000489003 HOXB6P17509 224 aaKnown RBP13.35□□□□□ -0.27
FDPS-213ENST00000489003 COX5AP20674 150 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 RPS4XP62701 263 aaKnown RBP13.35□□□□□ -0.27
FDPS-213ENST00000489003 ALG10Q5BKT4 473 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 CARD17Q5XLA6 110 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 ZNF770Q6IQ21 691 aaPredicted RBP13.35□□□□□ -0.27
FDPS-213ENST00000489003 LINGO2Q7L985 606 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 BHLHA15Q7RTS1 189 aaPredicted RBP13.35□□□□□ -0.27
FDPS-213ENST00000489003 YTHDF3Q7Z739 585 aaKnown RBP13.35□□□□□ -0.27
FDPS-213ENST00000489003 C20orf196Q8IYI0 205 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 STEAP2Q8NFT2 490 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 OR6X1Q8NH79 312 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 MARVELD3Q96A59 401 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 S100PBPQ96BU1 408 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 DUS3LQ96G46 650 aaKnown RBP13.35□□□□□ -0.27
FDPS-213ENST00000489003 LRR1Q96L50 414 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 DACH2Q96NX9 599 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 MUS81Q96NY9 551 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 OR10A4Q9H209 315 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 REEP1Q9H902 201 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 SLC24A3Q9HC58 644 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 MCCC2Q9HCC0 563 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 KCNN3Q9UGI6 736 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 U3KQV3 271 aa13.35□□□□□ -0.27
FDPS-213ENST00000489003 A0A1W2PRG6 482 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 SH3D21A4FU49 640 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 UNC119BA6NIH7 251 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 AKAP8O43823 692 aaKnown RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 KRT33AO76009 404 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 GASTP01350 101 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 THBDP07204 575 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 PPP3CBP16298 524 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 MPGP29372 298 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 DNAJA1P31689 397 aaKnown RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 IFNGR2P38484 337 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 GSSP48637 474 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 CTXN1P60606 82 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 PRPS1P60891 318 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 GABPB1Q06547 395 aaPredicted RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 MELKQ14680 651 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 DAZAP2Q15038 168 aaPredicted RBP13.34□□□□□ -0.27
FDPS-213ENST00000489003 GABRA6Q16445 453 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 ACKR1Q16570 336 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 C9orf135Q5VTT2 229 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 PGBD2Q6P3X8 592 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 TMEM179BQ7Z7N9 219 aa13.34□□□□□ -0.27
FDPS-213ENST00000489003 IGFN1Q86VF2 1251 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms