RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ZNF83P51522 516 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 ROR2Q01974 943 aaKnown RBP12.42□□□□□ -0.42
COL9A2-208ENST00000488463 POU3F1Q03052 451 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-208ENST00000488463 TGFBR3Q03167 851 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 SPOCK1Q08629 439 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 C1DQ13901 141 aaKnown RBP12.42□□□□□ -0.42
COL9A2-208ENST00000488463 PGGHGQ32M88 737 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 TBRG1Q3YBR2 411 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 C1QTNF12Q5T7M4 302 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 ABHD12BQ7Z5M8 362 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-208ENST00000488463 UEVLDQ8IX04 471 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 C20orf196Q8IYI0 205 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 LRRC75A-AS1Q8N1F1 130 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 WFDC11Q8NEX6 87 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 PFN4Q8NHR9 129 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 MAGEE2Q8TD90 523 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-208ENST00000488463 LIPHQ8WWY8 451 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 PIGTQ969N2 578 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 TPD52L3Q96J77 140 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 LRR1Q96L50 414 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 CCL19Q99731 98 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 EMC6Q9BV81 110 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 SPAG4Q9NPE6 437 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 DLL4Q9NR61 685 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF701Q9NV72 531 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF229Q9UJW7 825 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 NAV3Q8IVL0 2385 aa12.42□□□□□ -0.42
COL9A2-208ENST00000488463 RTTNQ86VV8 2226 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 ARPC4-TTLL3A0A0A6YYG9 625 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 SLC35F4A4IF30 521 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 J3KTA2 159 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 OVOL3O00110 214 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 ABCD4O14678 606 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 SERPINA1P01009 418 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 SOD3P08294 240 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 ADORA3P0DMS8 318 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 NCK1P16333 377 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 TAS2R41P59536 307 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 B3GLCTQ6Y288 498 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 OFCC1Q8IZS5 231 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 C10orf53Q8N6V4 93 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 RBM15BQ8NDT2 890 aaKnown RBP12.41□□□□□ -0.42
COL9A2-208ENST00000488463 TMEM239Q8WW34 195 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 PRRC1Q96M27 445 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 LRRC37BQ96QE4 947 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 KCTD14Q9BQ13 255 aaPredicted RBP12.41□□□□□ -0.42
COL9A2-208ENST00000488463 C1QTNF6Q9BXI9 259 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 NANSQ9NR45 359 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 CRNNQ9UBG3 495 aaPredicted RBP12.41□□□□□ -0.42
COL9A2-208ENST00000488463 CD300AQ9UGN4 299 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 AMDHD2Q9Y303 409 aa12.41□□□□□ -0.42
COL9A2-208ENST00000488463 ARFGEF3Q5TH69 2177 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF503-AS2A6NEH8 195 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 CD8AP01732 235 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 CDH2P19022 906 aaPredicted RBP12.4□□□□□ -0.42
COL9A2-208ENST00000488463 PTAFRP25105 342 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 SH3BGRP55822 239 aaPredicted RBP12.4□□□□□ -0.42
COL9A2-208ENST00000488463 ARF1P84077 181 aaKnown RBP12.4□□□□□ -0.42
COL9A2-208ENST00000488463 FOXD4Q12950 439 aaPredicted RBP12.4□□□□□ -0.42
COL9A2-208ENST00000488463 FHL1Q13642 323 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 CEACAM16Q2WEN9 425 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 IQCCQ4KMZ1 466 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 ANKRD16Q6P6B7 361 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 TMEM108Q6UXF1 575 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 ZNF627Q7L945 461 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 FITM2Q8N6M3 262 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 RNF148Q8N7C7 305 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 FAM86B1Q8N7N1 296 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 FAM156AQ8NDB6 213 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 PIK3C3Q8NEB9 887 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 GEMIN6Q8WXD5 167 aaKnown RBP12.4□□□□□ -0.42
COL9A2-208ENST00000488463 LZICQ8WZA0 190 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 FBXW5Q969U6 566 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 HSH2DQ96JZ2 352 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 GSX2Q9BZM3 304 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 CRLF2Q9HC73 371 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 OBP2BQ9NPH6 170 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 EGFL7Q9UHF1 273 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 TAGLN3Q9UI15 199 aa12.4□□□□□ -0.42
COL9A2-208ENST00000488463 ANK3Q12955 4377 aaKnown RBP12.39□□□□□ -0.43
COL9A2-208ENST00000488463 A0A096LPE4 126 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 A0A1W2PPZ6 126 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 E7EQL1 145 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 C11orf98E9PRG8 122 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 GSTA4O15217 222 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 PIP5K1CO60331 668 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 SMPD2O60906 423 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 TMCC2O75069 709 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 KRT33AO76009 404 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 OR7A10O76100 309 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 ZNF682O95780 498 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 IGLV1-44P01699 117 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 IFNW1P05000 195 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 HSD17B1P14061 328 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
COL9A2-208ENST00000488463 IFNGR1P15260 489 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 AHCYP23526 432 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 YAP1P46937 504 aaKnown RBP12.39□□□□□ -0.43
COL9A2-208ENST00000488463 PRPS1P60891 318 aa12.39□□□□□ -0.43
COL9A2-208ENST00000488463 NKX6-1P78426 367 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms