RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZER1Q7Z7L7 766 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 TMEM179BQ7Z7N9 219 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 OAFQ86UD1 273 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 TMEM123Q8N131 208 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 PAPD5Q8NDF8 572 aaKnown RBP9.76□□□□□ -0.85
UBE4B-210ENST00000488228 ANKK1Q8NFD2 765 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 FANK1Q8TC84 345 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 LRRC46Q96FV0 321 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 TXNDC15Q96J42 360 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 RAB3IPQ96QF0 476 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-210ENST00000488228 OR2M2Q96R28 347 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 SLCO5A1Q9H2Y9 848 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 KRCC1Q9NPI7 259 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-210ENST00000488228 SLC7A10Q9NS82 523 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 MALT1Q9UDY8 824 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 RCE1Q9Y256 329 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 HIF3AQ9Y2N7 669 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 CELSR2Q9HCU4 2923 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 LOC102725191A0A1B0GVB3 256 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 UNC119BA6NIH7 251 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 MCIDASD6RGH6 385 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ANKRD65E5RJM6 399 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 GNGT2O14610 69 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 AKAP8O43823 692 aaKnown RBP9.75□□□□□ -0.85
UBE4B-210ENST00000488228 E2F6O75461 281 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 UPK3AO75631 287 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 LYZL6O75951 148 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF432O94892 652 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ADAP00813 363 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 TSPAN19P0C672 248 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 COX5AP20674 150 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 IGHV1-2P23083 117 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 FPR3P25089 353 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 DNAJA1P31689 397 aaKnown RBP9.75□□□□□ -0.85
UBE4B-210ENST00000488228 UGT2B10P36537 528 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 SLC9A3P48764 834 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 BIDP55957 195 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ZP4Q12836 540 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 FAPQ12884 760 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 CAMK2DQ13557 499 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ACKR1Q16570 336 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 FBXW9Q5XUX1 488 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ANKRD34AQ69YU3 496 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF770Q6IQ21 691 aaPredicted RBP9.75□□□□□ -0.85
UBE4B-210ENST00000488228 STAC2Q6ZMT1 411 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 Q6ZT83 130 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 BEND4Q6ZU67 534 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 LINGO2Q7L985 606 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 CDK20Q8IZL9 346 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 HS3ST5Q8IZT8 346 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 LRRC75AQ8NAA5 344 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 AQP11Q8NBQ7 271 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ACBD4Q8NC06 268 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 OR10G2Q8NGC3 310 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 PYDC1Q8WXC3 89 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ASB10Q8WXI3 467 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 TNFRSF13CQ96RJ3 184 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 DENND2DQ9H6A0 471 aaPredicted RBP9.75□□□□□ -0.85
UBE4B-210ENST00000488228 YY1AP1Q9H869 796 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 FANCFQ9NPI8 374 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 INIPQ9NRY2 104 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 PARPBPQ9NWS1 579 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 DNAJB9Q9UBS3 223 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 IL20RAQ9UHF4 553 aa9.75□□□□□ -0.85
UBE4B-210ENST00000488228 FOXD3Q9UJU5 478 aaPredicted RBP9.75□□□□□ -0.85
UBE4B-210ENST00000488228 ABCA4P78363 2273 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 A0A1W2PRG6 482 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 SLC35F4A4IF30 521 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 HTR3EA5X5Y0 456 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 SLC43A1O75387 559 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 RAD51DO75771 328 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ITGA5P08648 1049 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 COX6B1P14854 86 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 HOXB6P17509 224 aaKnown RBP9.74□□□□□ -0.85
UBE4B-210ENST00000488228 RPL4P36578 427 aaKnown RBP9.74□□□□□ -0.85
UBE4B-210ENST00000488228 GSSP48637 474 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 HMGA2P52926 109 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 FXYD6P3P58550 94 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 SORDQ00796 357 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 RUNX1T1Q06455 604 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ZBED5Q49AG3 693 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 PHYHD1Q5SRE7 291 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF787Q6DD87 383 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 THSD4Q6ZMP0 1018 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
UBE4B-210ENST00000488228 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 KISS1RQ969F8 398 aaPredicted RBP9.74□□□□□ -0.85
UBE4B-210ENST00000488228 GTPBP3Q969Y2 492 aaKnown RBP9.74□□□□□ -0.85
UBE4B-210ENST00000488228 S100PBPQ96BU1 408 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 DUS3LQ96G46 650 aaKnown RBP9.74□□□□□ -0.85
UBE4B-210ENST00000488228 TSPAN32Q96QS1 320 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 KATNB1Q9BVA0 655 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 POLDIP3Q9BY77 421 aaKnown RBP9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ACTR6Q9GZN1 396 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ENKD1Q9H0I2 346 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 NTN4Q9HB63 628 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ASB6Q9NWX5 421 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 ELOVL5Q9NYP7 299 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 CRIM1Q9NZV1 1036 aa9.74□□□□□ -0.85
UBE4B-210ENST00000488228 UPB1Q9UBR1 384 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms