RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 CAMK2AQ9UQM7 478 aa10.82□□□□□ -0.68
TRA2B-214ENST00000487615 IGHV3-20A0A0C4DH32 117 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 CDC42EP2O14613 210 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 ARSBP15848 533 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 GDNFP39905 211 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 AADACL4Q5VUY2 407 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 OPN5Q6U736 354 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 GALNT6Q8NCL4 622 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 NLGN4YQ8NFZ3 816 aaPredicted RBP10.81□□□□□ -0.68
TRA2B-214ENST00000487615 EDAQ92838 391 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 SMIM19Q96E16 107 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 OR2M2Q96R28 347 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 A0A087WUJ7 227 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 ALOX12BO75342 701 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 GLB1P16278 677 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 FOLR3P41439 243 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 EEF1A1P68104 462 aaKnown RBP10.81□□□□□ -0.68
TRA2B-214ENST00000487615 SPEM1Q8N4L4 309 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 OR56B4Q8NH76 319 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 SMAP2Q8WU79 429 aaPredicted RBP10.81□□□□□ -0.68
TRA2B-214ENST00000487615 BCL2L14Q9BZR8 327 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 ALKBH4Q9NXW9 302 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 MUTYHQ9UIF7 546 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 ASCC3Q8N3C0 2202 aaKnown RBP10.81□□□□□ -0.68
TRA2B-214ENST00000487615 MAGEB4O15481 346 aaPredicted RBP10.81□□□□□ -0.68
TRA2B-214ENST00000487615 ICOSLGO75144 302 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 CBX7O95931 251 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 IGHG1P01857 330 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 IRF3Q14653 427 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 MELKQ14680 651 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 CDK5R1Q15078 307 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 HEPHL1Q6MZM0 1159 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 SLC25A24Q6NUK1 477 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 FAM180AQ6UWF9 173 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 ZNF767PQ75MW2 155 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 NDUFAF7Q7L592 441 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 ZNF454Q8N9F8 522 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 LRRC20Q8TCA0 184 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 STT3BQ8TCJ2 826 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 CCDC74AQ96AQ1 378 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 HAVCR1Q96D42 359 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 SNX18Q96RF0 628 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 PPIL3Q9H2H8 161 aaKnown RBP10.81□□□□□ -0.68
TRA2B-214ENST00000487615 FKRPQ9H9S5 495 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 MEMO1Q9Y316 297 aa10.81□□□□□ -0.68
TRA2B-214ENST00000487615 CSF3P09919 207 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 SLC26A5P58743 744 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 RRAS2P62070 204 aaPredicted RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 RPL18Q07020 188 aaKnown RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 BAK1Q16611 211 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 EMC4Q5J8M3 183 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 AWAT2Q6E213 333 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 PLCZ1Q86YW0 608 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 HOXB13Q92826 284 aaPredicted RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 NEDD4LQ96PU5 975 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 NUDT22Q9BRQ3 303 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 SARGQ9BW04 601 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 PCED1AQ9H1Q7 454 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 MYEF2Q9P2K5 600 aaKnown RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 FNDC1Q4ZHG4 1894 aaPredicted RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 GJE1A6NN92 205 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 IDSB3KWA1 339 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 I3L521 148 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 SCGNO76038 276 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 RAB3DO95716 219 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 EPHA4P54764 986 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 LSM11P83369 360 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 OVCH1Q7RTY7 1134 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 FTMTQ8N4E7 242 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 BEST4Q8NFU0 473 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 SLC7A6Q92536 515 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 NEURL2Q9BR09 285 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 RBM24Q9BX46 236 aaKnown RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 DNAJB12Q9NXW2 375 aaKnown RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 FRG2CA6NGY1 282 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 IL33O95760 270 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 HTR2BP41595 481 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 ARPC4P59998 168 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 RPL27P61353 136 aaKnown RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 LPAL2Q16609 132 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 ZNF770Q6IQ21 691 aaPredicted RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 BTN2A1Q7KYR7 527 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 KCTD9Q7L273 389 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 OR14L1PQ8NHC6 308 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 FAM71F1Q96KD3 344 aaPredicted RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 HCAR1Q9BXC0 346 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 METTL8Q9H825 291 aaKnown RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 TRAPPC4Q9Y296 219 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 OR2AT4A6NND4 320 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 TRAPPC2P0DI81 140 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 TRAPPC2BP0DI82 140 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 HOXB9P17482 250 aaPredicted RBP10.8□□□□□ -0.68
TRA2B-214ENST00000487615 PUDPQ08623 228 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 SPOCK1Q08629 439 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 FAM205BPQ63HN1 556 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 LAIR2Q6ISS4 152 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 TSSK2Q96PF2 358 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 TMEM43Q9BTV4 400 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 LIN7BQ9HAP6 207 aa10.8□□□□□ -0.68
TRA2B-214ENST00000487615 RNF215Q9Y6U7 377 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms