RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 OR2T29Q8NH02 315 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 UTP4Q969X6 686 aaKnown RBP17.27■□□□□ 0.36
SEC22A-208ENST00000487572 ZC3HAV1LQ96H79 300 aaKnown RBP17.27■□□□□ 0.36
SEC22A-208ENST00000487572 ALKBH3Q96Q83 286 aaPredicted RBP17.27■□□□□ 0.36
SEC22A-208ENST00000487572 OR2M2Q96R28 347 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 MED18Q9BUE0 208 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 ACTR6Q9GZN1 396 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 REEP1Q9H902 201 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 INIPQ9NRY2 104 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 VNN3Q9NY84 501 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 MALT1Q9UDY8 824 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 NDRG3Q9UGV2 375 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 SAMHD1Q9Y3Z3 626 aaKnown RBP17.27■□□□□ 0.36
SEC22A-208ENST00000487572 LYVE1Q9Y5Y7 322 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 U3KQV3 271 aa17.27■□□□□ 0.36
SEC22A-208ENST00000487572 A0A1W2PRG6 482 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 SH3D21A4FU49 640 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 SLC35F4A4IF30 521 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 ZNF726A6NNF4 738 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 CLOCKO15516 846 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 UPK3AO75631 287 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 ZNF432O94892 652 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 CST1P01037 141 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 PSMB1P20618 241 aaKnown RBP17.26■□□□□ 0.35
SEC22A-208ENST00000487572 OMPP47874 163 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 SLC9A3P48764 834 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 PCYT1AP49585 367 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 FOXG1P55316 489 aaPredicted RBP17.26■□□□□ 0.35
SEC22A-208ENST00000487572 BIDP55957 195 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 CAMK2DQ13557 499 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 ALG10Q5BKT4 473 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 NHLRC1Q6VVB1 395 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 BHLHA15Q7RTS1 189 aaPredicted RBP17.26■□□□□ 0.35
SEC22A-208ENST00000487572 IGFN1Q86VF2 1251 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 WDFY1Q8IWB7 410 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 S100PBPQ96BU1 408 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 WFIKKN1Q96NZ8 548 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 TNFRSF13CQ96RJ3 184 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 SLC24A3Q9HC58 644 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 HIF3AQ9Y2N7 669 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 GPR52Q9Y2T5 361 aa17.26■□□□□ 0.35
SEC22A-208ENST00000487572 MCIDASD6RGH6 385 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 GNGT2O14610 69 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 FKBP6O75344 327 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 RAD51DO75771 328 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 CDH2P19022 906 aaPredicted RBP17.25■□□□□ 0.35
SEC22A-208ENST00000487572 COX5AP20674 150 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 LIMS1P48059 325 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 RPS4XP62701 263 aaKnown RBP17.25■□□□□ 0.35
SEC22A-208ENST00000487572 TOP3AQ13472 1001 aaPredicted RBP17.25■□□□□ 0.35
SEC22A-208ENST00000487572 CCNIQ14094 377 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 ALKBH2Q6NS38 261 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 ZER1Q7Z7L7 766 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 TMEM123Q8N131 208 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 GPR137CQ8N3F9 429 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 ZNF433Q8N7K0 673 aaPredicted RBP17.25■□□□□ 0.35
SEC22A-208ENST00000487572 STEAP2Q8NFT2 490 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 OR4C15Q8NGM1 316 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 FAM222BQ8WU58 562 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 SLCO4A1Q96BD0 722 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 HDHD5Q9BXW7 423 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 YY1AP1Q9H869 796 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 MCCC2Q9HCC0 563 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 KCNN3Q9UGI6 736 aa17.25■□□□□ 0.35
SEC22A-208ENST00000487572 ASH1LQ9NR48 2969 aaKnown RBP17.25■□□□□ 0.35
SEC22A-208ENST00000487572 CIB4A0PJX0 185 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 UNC119BA6NIH7 251 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 OR6C65A6NJZ3 312 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 ZNF587BE7ETH6 402 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 M0R3G1 203 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 CCNB2O95067 398 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 BCL10O95999 233 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 ITGA5P08648 1049 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 TSPAN19P0C672 248 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 HOXB6P17509 224 aaKnown RBP17.24■□□□□ 0.35
SEC22A-208ENST00000487572 IFNGR2P38484 337 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 FHL1Q13642 323 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 STK11Q15831 433 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 ACKR1Q16570 336 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 ZBED5Q49AG3 693 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 LINGO2Q7L985 606 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 OR9Q2Q8NGE9 314 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 OR6N1Q8NGY5 312 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 GPA33Q99795 319 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 CCM2LQ9NUG4 571 aaPredicted RBP17.24■□□□□ 0.35
SEC22A-208ENST00000487572 TAS2R16Q9NYV7 291 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 ADGRG4Q8IZF6 3080 aa17.24■□□□□ 0.35
SEC22A-208ENST00000487572 PDLIM1O00151 329 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 EPXP11678 715 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 RPL4P36578 427 aaKnown RBP17.23■□□□□ 0.35
SEC22A-208ENST00000487572 DAP3P51398 398 aaKnown RBP17.23■□□□□ 0.35
SEC22A-208ENST00000487572 HMGA2P52926 109 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 CTXN1P60606 82 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 ROR2Q01974 943 aaKnown RBP17.23■□□□□ 0.35
SEC22A-208ENST00000487572 ANKDD1AQ495B1 522 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 PHYHD1Q5SRE7 291 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 HMBOX1Q6NT76 420 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 PGBD2Q6P3X8 592 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 C22orf34Q6ZV56 151 aa17.23■□□□□ 0.35
SEC22A-208ENST00000487572 ABHD12BQ7Z5M8 362 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms