RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 PLP1P60201 277 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 PSG7Q13046 419 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 ARHGAP19Q14CB8 494 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 ZNF630Q2M218 657 aaPredicted RBP3.15□□□□□ -1.91
SMC4-218ENST00000486711 C1orf94Q6P1W5 598 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 TRIM40Q6P9F5 258 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 C6orf89Q6UWU4 347 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 C19orf35Q6ZS72 473 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 RNF175Q8N4F7 328 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 OR2L3Q8NG85 312 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 SLC35E1Q96K37 410 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 FCRL1Q96LA6 429 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 MS4A4EQ96PG1 132 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 MBOAT4Q96T53 435 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 CENPKQ9BS16 269 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 OR11A1Q9GZK7 315 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 ADAP2Q9NPF8 381 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 DCAF16Q9NXF7 216 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 NUFIP1Q9UHK0 495 aaKnown RBP3.15□□□□□ -1.91
SMC4-218ENST00000486711 CTNNA3Q9UI47 895 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 NUP50Q9UKX7 468 aa3.15□□□□□ -1.91
SMC4-218ENST00000486711 A0A1W2PPV9 198 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 C12orf77C9JDV5 145 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 NPIPB7O75200 414 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 UPK3AO75631 287 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 CHTF8P0CG12 524 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 KITLGP21583 273 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 SLC26A3P40879 764 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 ACVR1Q04771 509 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 PPIL2Q13356 520 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 ARMC12Q5T9G4 340 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 IL34Q6ZMJ4 242 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 CCDC73Q6ZRK6 1079 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 RFLNAQ6ZTI6 216 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 RALGPS2Q86X27 583 aaPredicted RBP3.14□□□□□ -1.91
SMC4-218ENST00000486711 PIANPQ8IYJ0 282 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 Q8N7P7 452 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 LINC01555Q8NAE3 123 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 SUMF2Q8NBJ7 301 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 CCDC54Q8NEL0 328 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 OR1N2Q8NGR9 330 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 NDRG1Q92597 394 aaKnown RBP3.14□□□□□ -1.91
SMC4-218ENST00000486711 ELSPBP1Q96BH3 223 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 SH3GL1Q99961 368 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 NUP58Q9BVL2 599 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 FAIM2Q9BWQ8 316 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 TMEM59Q9BXS4 323 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 ILKAPQ9H0C8 392 aaPredicted RBP3.14□□□□□ -1.91
SMC4-218ENST00000486711 SRMSQ9H3Y6 488 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 MMP26Q9NRE1 261 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 ABCB10Q9NRK6 738 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 CALYQ9NYX4 217 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 RPS6KB2Q9UBS0 482 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 PISDQ9UG56 409 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 CDHR2Q9BYE9 1310 aa3.14□□□□□ -1.91
SMC4-218ENST00000486711 SMCO3A2RU48 225 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 CCL21O00585 134 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 DLGAP1O14490 977 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 GOSR2O14653 212 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 FAM189A1O60320 539 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 ERLIN1O75477 346 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 C1orf105O95561 183 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 CST1P01037 141 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 INSP01308 110 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 ALDOBP05062 364 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 UGT2B15P54855 530 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 FBXW4P57775 412 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 ENPEPQ07075 957 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 KIAA0087Q14695 138 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 VPS26BQ4G0F5 336 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 LRRC10Q5BKY1 277 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 CNIH2Q6PI25 160 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 SLC25A48Q6ZT89 311 aaKnown RBP3.13□□□□□ -1.91
SMC4-218ENST00000486711 MFSD6LQ8IWD5 586 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 TMEM61Q8N0U2 210 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 FAM71E2Q8N5Q1 922 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 FGF14Q92915 247 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 TSNARE1Q96NA8 513 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 NRTNQ99748 197 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 ECSITQ9BQ95 431 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 FAM192AQ9GZU8 254 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 ZNF225Q9UK10 706 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 STARD10Q9Y365 291 aa3.13□□□□□ -1.91
SMC4-218ENST00000486711 RAI1Q7Z5J4 1906 aaPredicted RBP3.13□□□□□ -1.91
SMC4-218ENST00000486711 PDS5BQ9NTI5 1447 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 IGLV3-22A0A075B6J6 115 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 IGKV6D-21A0A0A0MT36 114 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 A0A0G2JN53 185 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 PPP1R2P9O14990 202 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 TNFSF13O75888 250 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 AGTP01019 485 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 IGHV2-5P01817 119 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 IGHV4-34P06331 123 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 CRYGBP07316 175 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 HNRNPH3P31942 346 aaKnown RBP3.12□□□□□ -1.91
SMC4-218ENST00000486711 DRD3P35462 400 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 GPR6P46095 362 aaPredicted RBP3.12□□□□□ -1.91
SMC4-218ENST00000486711 CSNK1DP48730 415 aa3.12□□□□□ -1.91
SMC4-218ENST00000486711 SUB1P53999 127 aaKnown RBP eCLIP3.12□□□□□ -1.91
SMC4-218ENST00000486711 MRPS22P82650 360 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms