RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 EDNRAP25101 427 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 GRPRP30550 384 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 LCN6P62502 163 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 EEF1A1P5Q5VTE0 462 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 OR5M10Q6IEU7 315 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 TIGD4Q8IY51 512 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 NEURL2Q9BR09 285 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 AKIRIN1Q9H9L7 192 aaPredicted RBP18.4■□□□□ 0.54
HPS3-206ENST00000486530 SRA1Q9HD15 236 aaKnown RBP18.4■□□□□ 0.54
HPS3-206ENST00000486530 KLRF1Q9NZS2 232 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 TBC1D24Q9ULP9 559 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 FRYLO94915 3013 aa18.4■□□□□ 0.54
HPS3-206ENST00000486530 LOC102723996A0A087X1L8 192 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 TRBV2A0A0J9YWF9 115 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 LNP1A1A4G5 178 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 ARHGEF9O43307 516 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 GPRIN2O60269 458 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 GDF9O60383 454 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 SLC19A2O60779 497 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 TMCC2O75069 709 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 OR6A2O95222 327 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 IGHMP01871 453 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 GP1BAP07359 652 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 ACP1P24666 158 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 PTBP1P26599 531 aaKnown RBP eCLIP18.39■□□□□ 0.54
HPS3-206ENST00000486530 CCKBRP32239 447 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 APOBEC1P41238 236 aaKnown RBP18.39■□□□□ 0.54
HPS3-206ENST00000486530 RPL27P61353 136 aaKnown RBP18.39■□□□□ 0.54
HPS3-206ENST00000486530 BAK1Q16611 211 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 ZNF684Q5T5D7 378 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 FAM27D1Q5T7N8 215 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 SLC6A19Q695T7 634 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 LYPD8Q6UX82 237 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 KCTD20Q7Z5Y7 419 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 NR2C2APQ86WQ0 139 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 CADM3Q8N126 398 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 OR6V1Q8N148 313 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 RPS4Y2Q8TD47 263 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 HAVCR2Q8TDQ0 301 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 DNAJA3Q96EY1 480 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 TTYH2Q9BSA4 534 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 OR11A1Q9GZK7 315 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 SYT4Q9H2B2 425 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 TIGARQ9NQ88 270 aa18.39■□□□□ 0.54
HPS3-206ENST00000486530 MRPL39Q9NYK5 338 aaKnown RBP18.39■□□□□ 0.54
HPS3-206ENST00000486530 DCTN6O00399 190 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 GATBO75879 557 aaKnown RBP18.39■□□□□ 0.53
HPS3-206ENST00000486530 FBXO45P0C2W1 286 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 AHCYP23526 432 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 MSX1P28360 303 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 FAM69BQ5VUD6 431 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 CNIH2Q6PI25 160 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 CDC20BQ86Y33 519 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 ZNF519Q8TB69 540 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 DEFB126Q9BYW3 111 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 TXNIPQ9H3M7 391 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 SDHAF3Q9NRP4 125 aa18.39■□□□□ 0.53
HPS3-206ENST00000486530 TRAV1-2A0A0B4J238 106 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 C2orf72A6NCS6 295 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 C9J4A7 227 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 TNFRSF10AO00220 468 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 PLPP3O14495 311 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 ARL6IP5O75915 188 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 OR2J2O76002 312 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 TACSTD2P09758 323 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 CCL4P13236 92 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 SCN1BQ07699 218 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 MRPL28Q13084 256 aaKnown RBP18.38■□□□□ 0.53
HPS3-206ENST00000486530 MFSD13AQ14CX5 517 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 PCOLCEQ15113 449 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 ACKR1Q16570 336 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 IDNKQ5T6J7 187 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 SFXN4Q6P4A7 337 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 FAM198BQ6UWH4 519 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 GDPD3Q7L5L3 318 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 FAM220AQ7Z4H9 259 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 OR13C5Q8NGS8 318 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 ELP5Q8TE02 316 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 RHBDD1Q8TEB9 315 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 MR1Q95460 341 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 SOSTQ9BQB4 213 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 MED11Q9P086 117 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 PPP4R1LQ9P1A2 415 aa18.38■□□□□ 0.53
HPS3-206ENST00000486530 IGLV3-32A0A0A0MS00 114 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 B4DXG7 233 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 FTCDNL1E5RQL4 147 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 ETV2O00321 342 aaPredicted RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 ZNF208O43345 1280 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 SPNP16150 400 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 EVX1P49640 407 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 NTRK2Q16620 822 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 PYDC2Q56P42 97 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 TRILQ7L0X0 811 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 PM20D2Q8IYS1 436 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 ZNF417Q8TAU3 575 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 PMEPA1Q969W9 287 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 ZNF587Q96SQ5 575 aaPredicted RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 ULBP3Q9BZM4 244 aa18.37■□□□□ 0.53
HPS3-206ENST00000486530 CCDC86Q9H6F5 360 aaKnown RBP18.37■□□□□ 0.53
HPS3-206ENST00000486530 METTL7AQ9H8H3 244 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms