RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	NAA11	Q9BSU3	229 aa	Predicted RBP	13.2	□□□□□ -0.3
NR1H3-222	ENST00000483882	OPN3	Q9H1Y3	402 aa	Predicted RBP	13.2	□□□□□ -0.3
NR1H3-222	ENST00000483882	FKRP	Q9H9S5	495 aa		13.2	□□□□□ -0.3
NR1H3-222	ENST00000483882	NTN4	Q9HB63	628 aa		13.2	□□□□□ -0.3
NR1H3-222	ENST00000483882	MRPL39	Q9NYK5	338 aa	Known RBP	13.2	□□□□□ -0.3
NR1H3-222	ENST00000483882	STX18	Q9P2W9	335 aa	Known RBP	13.2	□□□□□ -0.3
NR1H3-222	ENST00000483882	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.2	□□□□□ -0.3
NR1H3-222	ENST00000483882	PLPP3	O14495	311 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	CDC42EP2	O14613	210 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	ARHGEF9	O43307	516 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	KLF4	O43474	513 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	TIPRL	O75663	272 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	MT-ATP6	P00846	226 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	INHBB	P09529	407 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	TSPAN19	P0C672	248 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	POU2F1	P14859	743 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	LAPTM4A	Q15012	233 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	RNPS1	Q15287	305 aa	Known RBP	13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	SHE	Q5VZ18	495 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZNF474	Q6S9Z5	364 aa	Predicted RBP	13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	TMPRSS11F	Q6ZWK6	438 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	H1FNT	Q75WM6	255 aa	Predicted RBP	13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	FAM214B	Q7L5A3	538 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZER1	Q7Z7L7	766 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	CXorf67	Q86X51	503 aa	Predicted RBP	13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	KRTAP1-3	Q8IUG1	177 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	EPHX4	Q8IUS5	362 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	WDFY1	Q8IWB7	410 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	RNF113B	Q8IZP6	322 aa	Known RBP	13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	SCAI	Q8N9R8	606 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	PIGX	Q8TBF5	258 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	BPIFA2	Q96DR5	249 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	PIK3IP1	Q96FE7	263 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZNF385A	Q96PM9	386 aa	Known RBP	13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	MED18	Q9BUE0	208 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZNF226	Q9NYT6	803 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	TAS2R5	Q9NYW4	299 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	KLHL9	Q9P2J3	617 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	B3GALT5	Q9Y2C3	310 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	CORIN	Q9Y5Q5	1042 aa		13.19	□□□□□ -0.3
NR1H3-222	ENST00000483882	LOC102725191	A0A1B0GVB3	256 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZNF724	A8MTY0	619 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882		H3BNX3	289 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	TNFRSF11B	O00300	401 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	SMPD2	O60906	423 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	CST1	P01037	141 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	YES1	P07947	543 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	HLA-DOB	P13765	273 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZNF26	P17031	533 aa	Predicted RBP	13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	GPR4	P46093	362 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	SMIM11A	P58511	58 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	PMS2P3	Q13401	168 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	MFSD13A	Q14CX5	517 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882		Q5PR19	223 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZNF770	Q6IQ21	691 aa	Predicted RBP	13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	CLEC9A	Q6UXN8	241 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	ADPRHL1	Q8NDY3	354 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	OR9K2	Q8NGE7	335 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	OR5J2	Q8NH18	312 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	SF3B5	Q9BWJ5	86 aa	Known RBP	13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	KLHL4	Q9C0H6	718 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	UBTD1	Q9HAC8	227 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	GP6	Q9HCN6	339 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	S100A14	Q9HCY8	104 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	FANCF	Q9NPI8	374 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	NANS	Q9NR45	359 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	GLRX2	Q9NS18	164 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	ARMC1	Q9NVT9	282 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZNF229	Q9UJW7	825 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	RASD1	Q9Y272	281 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	AP4S1	Q9Y587	144 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	FLVCR1	Q9Y5Y0	555 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882		U3KQV3	271 aa		13.18	□□□□□ -0.3
NR1H3-222	ENST00000483882	DEFB108A	A8MXU0	73 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	SIAH2	O43255	324 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	RPS4X	P62701	263 aa	Known RBP	13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	SLC34A1	Q06495	639 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZP4	Q12836	540 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	GTF2IRD2B	Q6EKJ0	949 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	TMEM225	Q6GV28	225 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	HMBOX1	Q6NT76	420 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	CREB3L2	Q70SY1	520 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	GTF2IRD2	Q86UP8	949 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	MED12L	Q86YW9	2145 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	HS3ST5	Q8IZT8	346 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	ZNF610	Q8N9Z0	462 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	LRRC75A	Q8NAA5	344 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	OR9Q2	Q8NGE9	314 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	OR13C2	Q8NGS9	318 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	MOSPD2	Q8NHP6	518 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	PYDC1	Q8WXC3	89 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	FAM46A	Q96IP4	442 aa	Known RBP	13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	OXGR1	Q96P68	337 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	ASPN	Q9BXN1	380 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	PLSCR4	Q9NRQ2	329 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	ELOVL5	Q9NYP7	299 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	PROCR	Q9UNN8	238 aa		13.17	□□□□□ -0.3
NR1H3-222	ENST00000483882	SAMHD1	Q9Y3Z3	626 aa	Known RBP	13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms