RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 BGNP21810 368 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 HMGB2P26583 209 aaKnown RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 IL12BP29460 328 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 LCN1P31025 176 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SAA4P35542 130 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 OPRD1P41143 372 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 BDKRB1P46663 353 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 RAG2P55895 527 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 MRPS22P82650 360 aaKnown RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SCRN3Q0VDG4 424 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 ORC2Q13416 577 aaPredicted RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 ILKQ13418 452 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 FASTKQ14296 549 aaKnown RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SIX1Q15475 284 aaPredicted RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 CD226Q15762 336 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 DGUOKQ16854 277 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 RGS21Q2M5E4 152 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 TP53I3Q53FA7 332 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SPESP1Q6UW49 350 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 HSDL2Q6YN16 418 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 TMPRSS11AQ6ZMR5 421 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 STAC2Q6ZMT1 411 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SLC35D2Q76EJ3 337 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 PLCZ1Q86YW0 608 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 IQCKQ8N0W5 287 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 TTC29Q8NA56 475 aaPredicted RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 NECAP1Q8NC96 275 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SDR9C7Q8NEX9 313 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 BEST4Q8NFU0 473 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 OR4A15Q8NGL6 344 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 OR4Q3Q8NH05 313 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 CNIH3Q8TBE1 160 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 MRAPQ8TCY5 172 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 HTR3CQ8WXA8 447 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 CCDC126Q96EE4 140 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 ALKBH3Q96Q83 286 aaPredicted RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 OR5B2Q96R09 309 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 FAM173AQ9BQD7 235 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 MFFQ9GZY8 342 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SAV1Q9H4B6 383 aaPredicted RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 NTN4Q9HB63 628 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SLC38A10Q9HBR0 1119 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 VCX3AQ9NNX9 186 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 SDHAF3Q9NRP4 125 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 EMC3Q9P0I2 261 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 MYEF2Q9P2K5 600 aaKnown RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 UXTQ9UBK9 157 aaPredicted RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 EIF3KQ9UBQ5 218 aaKnown RBP2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 KIF25Q9UIL4 384 aa2.24□□□□□ -2.05
LAPTM4A-202ENST00000483117 USP42Q9H9J4 1324 aaKnown RBP2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 A0A0A6YYH2 397 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 C1orf232A0A0U1RR37 186 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 A6NJ64 397 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 RNASEK-C17orf49H0YIS7 233 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 EIF3HO15372 352 aaKnown RBP eCLIP2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 GPAA1O43292 621 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 AIREO43918 545 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 PFKFB2O60825 505 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 FCN3O75636 299 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 CCNB2O95067 398 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 VAPBO95292 243 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 LCA5LO95447 670 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 JCHAINP01591 159 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 GAPDHP04406 335 aaKnown RBP2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 RPN2P04844 631 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 C2P06681 752 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 H2AFZP0C0S5 128 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 CD1DP15813 335 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 NQO2P16083 231 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 PMCHP20382 165 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 LMO2P25791 158 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 FCGR2CP31995 323 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 ID1P41134 155 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 P2RY2P41231 377 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 CSKP41240 450 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 QARSP47897 775 aaKnown RBP2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 GSK3BP49841 420 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 UCNP55089 124 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 RND3P61587 244 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 ERVK-25P63136 954 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 LCN2P80188 198 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 PAX2Q02962 417 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 TLE4Q04727 773 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 STX3Q13277 289 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 EIF4EBP2Q13542 120 aaPredicted RBP2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 RUNX3Q13761 415 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 DMC1Q14565 340 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 SF3A2Q15428 464 aaKnown RBP2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 MLF2Q15773 248 aaPredicted RBP2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 MRPL23Q16540 153 aaKnown RBP2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 UPP1Q16831 310 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 DMRTC1Q5HYR2 192 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 ATAD3CQ5T2N8 411 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 C9orf66Q5T8R8 295 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 NEPROQ6NW34 567 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 PNCKQ6P2M8 343 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 PRMT9Q6P2P2 845 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 RFWD3Q6PCD5 774 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 PLEKHG7Q6ZR37 379 aa2.23□□□□□ -2.05
LAPTM4A-202ENST00000483117 SLC25A48Q6ZT89 311 aaKnown RBP2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms