RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ALG10Q5BKT4 473 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 FNDC7Q5VTL7 733 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 FAM199XQ6PEV8 388 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 C16orf47Q6ZP98 133 aaPredicted RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 FAM122BQ7Z309 247 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 MARCH3Q86UD3 253 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 OR6V1Q8N148 313 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 SYS1Q8N2H4 156 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 TEX19Q8NA77 164 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 POMGNT2Q8NAT1 580 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 SLC25A38Q96DW6 304 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 TCTN2Q96GX1 697 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 ADAD1Q96M93 576 aaKnown RBP9.83□□□□□ -0.84
VPS52-217ENST00000478934 C20orf85Q9H1P6 137 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 KCNK15Q9H427 330 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 RXFP3Q9NSD7 469 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 FRRS1LQ9P0K9 344 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 NUBP2Q9Y5Y2 271 aa9.83□□□□□ -0.84
VPS52-217ENST00000478934 ZSCAN5BA6NJL1 495 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ZNF879B4DU55 563 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 DOK2O60496 412 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ICMTO60725 284 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 GATBO75879 557 aaKnown RBP9.82□□□□□ -0.84
VPS52-217ENST00000478934 GLCEO94923 617 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 CFDP00746 253 aaPredicted RBP9.82□□□□□ -0.84
VPS52-217ENST00000478934 UBL4AP11441 157 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ADRA2CP18825 462 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 GRK6P43250 576 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 CCR5P51681 352 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 RPL18Q07020 188 aaKnown RBP9.82□□□□□ -0.84
VPS52-217ENST00000478934 KLF9Q13886 244 aaPredicted RBP9.82□□□□□ -0.84
VPS52-217ENST00000478934 MESTQ5EB52 335 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ZBTB37Q5TC79 503 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 C1orf189Q5VU69 101 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 LIPNQ5VXI9 398 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 FAM109AQ8N4B1 249 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 LRRC75AQ8NAA5 344 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ZNF680Q8NEM1 530 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 OR11G2Q8NGC1 345 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ZNF563Q8TA94 476 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 MAP6Q96JE9 813 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 TSPAN32Q96QS1 320 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 MMP25Q9NPA2 562 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 LANCL2Q9NS86 450 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 U3KQ87 197 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 UNC13CQ8NB66 2214 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 MEIS3P1A6NDR6 274 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ARPC3O15145 178 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ARL6IP5O75915 188 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 AKR7A3O95154 331 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 MPC2O95563 127 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 MAS1P04201 325 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 LGALS3BPQ08380 585 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ZNF684Q5T5D7 378 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 SLC25A25Q6KCM7 469 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 UNQ9370/PRO34162Q6UXP9 181 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 DPY19L4Q7Z388 723 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 JAZF1Q86VZ6 243 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 SLITRK4Q8IW52 837 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 OR2T35Q8NGX2 323 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 SLC25A36Q96CQ1 311 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 CCDC120Q96HB5 630 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 GAL3ST1Q99999 423 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 SYT4Q9H2B2 425 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 ZCCHC4Q9H5U6 513 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 SPATA2Q9UM82 520 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 PPIEQ9UNP9 301 aaKnown RBP9.82□□□□□ -0.84
VPS52-217ENST00000478934 SLC6A5Q9Y345 797 aa9.82□□□□□ -0.84
VPS52-217ENST00000478934 IGHV1OR15-9A0A0B4J2B8 117 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 C2orf72A6NCS6 295 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 IFITM5A6NNB3 132 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 ARPC1BO15143 372 aaKnown RBP9.81□□□□□ -0.84
VPS52-217ENST00000478934 UPK3AO75631 287 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 CRYZL1O95825 349 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 SERPINA3P01011 423 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 FBXO45P0C2W1 286 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 ANXA7P20073 488 aaKnown RBP9.81□□□□□ -0.84
VPS52-217ENST00000478934 DNASE1P24855 282 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 ITPKBP27987 946 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 DCTDP32321 178 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 OR1D5P58170 312 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 OC90Q02509 493 aaPredicted RBP9.81□□□□□ -0.84
VPS52-217ENST00000478934 ZNF117Q03924 483 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 RAB30Q15771 203 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 CLPPQ16740 277 aaPredicted RBP9.81□□□□□ -0.84
VPS52-217ENST00000478934 WBP2NLQ6ICG8 309 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 OR5M10Q6IEU7 315 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 CHRDL2Q6WN34 429 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 PM20D2Q8IYS1 436 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 EXD3Q8N9H8 876 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 NUDT9Q9BW91 350 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 C1QTNF6Q9BXI9 259 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 HEXA-AS1Q9H8Q6 139 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 DLL4Q9NR61 685 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 UBQLN4Q9NRR5 601 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 IKZF2Q9UKS7 526 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 PLCL2Q9UPR0 1127 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 ZNF281Q9Y2X9 895 aa9.81□□□□□ -0.84
VPS52-217ENST00000478934 MUC3AQ02505 3323 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms