RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 LRTOMTQ8WZ04 291 aa15.52■□□□□ 0.08
PTPN7-209ENST00000477554 FNDC11Q9BVV2 318 aa15.52■□□□□ 0.08
PTPN7-209ENST00000477554 TAPBPLQ9BX59 468 aa15.52■□□□□ 0.08
PTPN7-209ENST00000477554 RNPEPL1Q9HAU8 725 aa15.52■□□□□ 0.08
PTPN7-209ENST00000477554 A4GNTQ9UNA3 340 aa15.52■□□□□ 0.08
PTPN7-209ENST00000477554 TRAPPC13A5PLN9 417 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 J3KTA2 159 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 FZD7O75084 574 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 ATP6V1G2O95670 118 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 THRBP10828 461 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 ANPEPP15144 967 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 PPP3CBP16298 524 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 DNASE1P24855 282 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 SPOCK1Q08629 439 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 ST3GAL3Q11203 375 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 PIN1Q13526 163 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-209ENST00000477554 KEAP1Q14145 624 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 GK3PQ14409 553 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 BEX5Q5H9J7 111 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 ULK3Q6PHR2 472 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 ZNF704Q6ZNC4 412 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-209ENST00000477554 ALPK2Q86TB3 2170 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 PQLC1Q8N2U9 271 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 OR52N5Q8NH56 324 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 DNAJA4Q8WW22 397 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-209ENST00000477554 CENPNQ96H22 339 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-209ENST00000477554 C1QTNF6Q9BXI9 259 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 CXXC4Q9H2H0 198 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 SELENONQ9NZV5 590 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 MALT1Q9UDY8 824 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 MED13LQ71F56 2210 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 DSCAMO60469 2012 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 MS4A18H0YCH9 400 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 GPR171O14626 319 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 UPK3AO75631 287 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 PRSS23O95084 383 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 RRM2P31350 389 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 SPIBQ01892 262 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 BSPH1Q075Z2 132 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 GABRA6Q16445 453 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 MS4A18Q3C1V0 323 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 TMEM225Q6GV28 225 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 LINC00114Q6XXX2 140 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 SPNS3Q6ZMD2 512 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 AAED1Q7RTV5 226 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 OFCC1Q8IZS5 231 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 WDR31Q8NA23 367 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 NINJ1Q92982 152 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 TMEM45BQ96B21 275 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 SLC41A3Q96GZ6 507 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 PKP2Q99959 881 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 PRSS27Q9BQR3 290 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 TMEM204Q9BSN7 226 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 HDHD5Q9BXW7 423 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 OR10A4Q9H209 315 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 ANKRD19PQ9H560 264 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 REEP1Q9H902 201 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 NMNAT1Q9HAN9 279 aaPredicted RBP15.51■□□□□ 0.07
PTPN7-209ENST00000477554 C12orf10Q9HB07 376 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 RIMS3Q9UJD0 308 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 SLC7A7Q9UM01 511 aa15.51■□□□□ 0.07
PTPN7-209ENST00000477554 TRAV36DV7A0A075B6V5 113 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 KPNA4O00629 521 aaPredicted RBP15.5■□□□□ 0.07
PTPN7-209ENST00000477554 FFAR1O14842 300 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 GOSR1O95249 250 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 GADD45GO95257 159 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 H1F0P07305 194 aaKnown RBP15.5■□□□□ 0.07
PTPN7-209ENST00000477554 CDH2P19022 906 aaPredicted RBP15.5■□□□□ 0.07
PTPN7-209ENST00000477554 ARHGDIAP52565 204 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 LSM11P83369 360 aaKnown RBP eCLIP15.5■□□□□ 0.07
PTPN7-209ENST00000477554 DEFB113Q30KQ7 82 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 PHYHD1Q5SRE7 291 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 NCMAPQ5T1S8 102 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 SWT1Q5T5J6 900 aaKnown RBP15.5■□□□□ 0.07
PTPN7-209ENST00000477554 AMIGO2Q86SJ2 522 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 LRRC17Q8N6Y2 441 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 PIK3C3Q8NEB9 887 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 KBTBD8Q8NFY9 601 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 ZNF837Q96EG3 531 aaPredicted RBP15.5■□□□□ 0.07
PTPN7-209ENST00000477554 DHRS1Q96LJ7 313 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 ALKBH3Q96Q83 286 aaPredicted RBP15.5■□□□□ 0.07
PTPN7-209ENST00000477554 EPYCQ99645 322 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 FOXC2Q99958 501 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 SF3B5Q9BWJ5 86 aaKnown RBP15.5■□□□□ 0.07
PTPN7-209ENST00000477554 ASB6Q9NWX5 421 aa15.5■□□□□ 0.07
PTPN7-209ENST00000477554 A0A1W2PRQ8 180 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 OR5H1A6NKK0 313 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 E2F6O75461 281 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 HMGA2P52926 109 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 CLDN17P56750 224 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 SLC34A1Q06495 639 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 DGCR6Q14129 220 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 TRAM2Q15035 370 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 PPA1Q15181 289 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 ACKR1Q16570 336 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 FAM69AQ5T7M9 428 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 HMBOX1Q6NT76 420 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 ADAM5Q6NVV9 412 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 NIPAL3Q6P499 406 aa15.49■□□□□ 0.07
PTPN7-209ENST00000477554 NHLRC1Q6VVB1 395 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 267.1 ms