RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 KLHL21Q9UJP4 597 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PLAGL1Q9UM63 463 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 PRPF19Q9UMS4 504 aaKnown RBP2.16□□□□□ -2.06
XRN1-211ENST00000477237 SNX24Q9Y343 169 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 ALG6Q9Y672 507 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SLCO1B1Q9Y6L6 691 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 FMN1Q68DA7 1419 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 SETD5Q9C0A6 1442 aa2.16□□□□□ -2.06
XRN1-211ENST00000477237 MYH15Q9Y2K3 1946 aa2.15□□□□□ -2.06
XRN1-211ENST00000477237 CEMIPQ8WUJ3 1361 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 JCADQ9P266 1359 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 A0A0G2JMP0 313 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 A0A0X1KG70 313 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 A0A1W2PPM1 405 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 A0A1W2PR77 199 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 LINC00862A6NCI5 91 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 VSTM2BA6NLU5 285 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 HACD1B0YJ81 288 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FAM25AB3EWG3 89 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FAM25CB3EWG5 89 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FAM25GB3EWG6 89 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 TRDCB7Z8K6 153 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CDC7O00311 574 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 KPNA3O00505 521 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 RAB29O14966 203 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 RS1O15537 224 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 NDUFS4O43181 175 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ZNF749O43361 778 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PAGE4O60829 102 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CTDNEP1O95476 244 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CCNE2O96020 404 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SERPINA1P01009 418 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 GH2P01242 217 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 IFNA5P01569 189 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 IGKV3-15P01624 115 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FTH1P02794 183 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 RPN2P04844 631 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CHRNGP07510 517 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 MBL2P11226 248 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 LIFP15018 202 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 NQO1P15559 274 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 GOT1P17174 413 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 EFNA1P20827 205 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 BGNP21810 368 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 GABRR1P24046 479 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PAX6P26367 422 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CALML3P27482 149 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FOXN2P32314 431 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CA5AP35218 305 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PCK1P35558 622 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CPOXP36551 454 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ARR3P36575 388 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 AQP2P41181 271 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 APOBEC1P41238 236 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 MATKP42679 507 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 NKX2-1P43699 371 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 SERPINB10P48595 397 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 RBP2P50120 134 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PPT1P50897 306 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CCR6P51684 374 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SUOXP51687 545 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 NDST1P52848 882 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SEC61GP60059 68 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CDC42P60953 191 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 RAP1BP61224 184 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ERVK-8P63133 956 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 MRPS22P82650 360 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 GTF2BQ00403 316 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 OGDHQ02218 1023 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PAX5Q02548 391 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 PUDPQ08623 228 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 MAD2L1Q13257 205 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 MED21Q13503 144 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ELAVL3Q14576 367 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 CDK10Q15131 360 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 RBBP7Q16576 425 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CDO1Q16878 200 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 KNOP1Q1ED39 458 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 DUOXA1Q1HG43 343 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 EXOC3L2Q2M3D2 409 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 COL28A1Q2UY09 1125 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ZNF699Q32M78 642 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ZBED5Q49AG3 693 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 AKIRIN2Q53H80 203 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ARMCX4Q5H9R4 360 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CTSL3PQ5NE16 218 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SYT6Q5T7P8 510 aaPredicted RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 LGSNQ5TDP6 509 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ASPHD2Q6ICH7 369 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 ACSM5Q6NUN0 579 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 C11orf63Q6NUN7 778 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 H3F3CQ6NXT2 135 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SLC39A4Q6P5W5 647 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 FAM198BQ6UWH4 519 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 TFAP2EQ6VUC0 442 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 SPNS3Q6ZMD2 512 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 MBOAT1Q6ZNC8 495 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 CFAP77Q6ZQR2 320 aa2.15□□□□□ -2.07
XRN1-211ENST00000477237 APTXQ7Z2E3 356 aaKnown RBP2.15□□□□□ -2.07
XRN1-211ENST00000477237 ERASQ7Z444 233 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms