RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CRELD1Q96HD1 420 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 TXNDC15Q96J42 360 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 COG8Q96MW5 612 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 PIGQQ9BRB3 760 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 YIPF3Q9GZM5 350 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 TXNIPQ9H3M7 391 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 ADGRL4Q9HBW9 690 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 FANCFQ9NPI8 374 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 RSL24D1Q9UHA3 163 aaKnown RBP12.96□□□□□ -0.34
COL4A6-206ENST00000477085 MRPS18CQ9Y3D5 142 aaKnown RBP12.96□□□□□ -0.34
COL4A6-206ENST00000477085 HDGFL3Q9Y3E1 203 aa12.96□□□□□ -0.34
COL4A6-206ENST00000477085 A0A0J9YW62 118 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 SLC22A31A6NKX4 558 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 KLK10O43240 276 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 ARHGEF9O43307 516 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 MRPL3P09001 348 aaKnown RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 PAICSP22234 425 aaKnown RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 PAX7P23759 505 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 FKBP2P26885 142 aaKnown RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 SLC25A1P53007 311 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 SLC16A1P53985 500 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 CLDN20P56880 219 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 RPL27P61353 136 aaKnown RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 RPS7P62081 194 aaKnown RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 RAC1P63000 192 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 MELKQ14680 651 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 TIGD6Q17RP2 521 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 OR2G6Q5TZ20 316 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 GPR139Q6DWJ6 353 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 GALNTL5Q7Z4T8 443 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 OR6V1Q8N148 313 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 PROKR2Q8NFJ6 384 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 FCGR1BQ92637 280 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 ZMYND19Q96E35 227 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 DOK1Q99704 481 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 TTTY12Q9BZ98 90 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 OR2B2Q9GZK3 357 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF703Q9H7S9 590 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 RPRD1BQ9NQG5 326 aaKnown RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 HAO2Q9NYQ3 351 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 TNFRSF10DQ9UBN6 386 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 BOKQ9UMX3 212 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-206ENST00000477085 B3GALT5Q9Y2C3 310 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 KCNMB2Q9Y691 235 aa12.95□□□□□ -0.34
COL4A6-206ENST00000477085 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 GLSO94925 669 aaPredicted RBP12.94□□□□□ -0.34
COL4A6-206ENST00000477085 SBK2P0C263 348 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 NR4A1P22736 598 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 GDF1P27539 372 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 PYCR1P32322 319 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 ACVR1BP36896 505 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 STARP49675 285 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 HCCSP53701 268 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 GFRA1P56159 465 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 CLDN15P56746 228 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 H3F3AP84243 136 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 TMED1Q13445 227 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 MED22Q15528 200 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 IGFL2Q6UWQ7 119 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 GGNQ86UU5 652 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 JAZF1Q86VZ6 243 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 KCNE4Q8WWG9 221 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 SMPDL3BQ92485 455 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 SCMH1Q96GD3 660 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 JAM3Q9BX67 310 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 RNF32Q9H0A6 362 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 SRA1Q9HD15 236 aaKnown RBP12.94□□□□□ -0.34
COL4A6-206ENST00000477085 ERVK13-1Q9NX77 482 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 ERGIC3Q9Y282 383 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 TRAPPC4Q9Y296 219 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 A0A1W2PNV4 684 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 IRGMA1A4Y4 181 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 H3BMQ9 156 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 SULT2B1O00204 365 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 CDK2AP1O14519 115 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 TRMUO75648 421 aaKnown RBP12.94□□□□□ -0.34
COL4A6-206ENST00000477085 ATE1O95260 518 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 PMS2P2O95744 297 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 TFP02787 698 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 HSMCR30P0CW71 290 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 IFNGR1P15260 489 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 GTF2E2P29084 291 aaKnown RBP12.94□□□□□ -0.34
COL4A6-206ENST00000477085 PCSK6P29122 969 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 HSF1Q00613 529 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 SPHARQ15513 63 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF239Q16600 458 aaKnown RBP12.94□□□□□ -0.34
COL4A6-206ENST00000477085 ARMCX4Q5H9R4 360 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 ZNF367Q7RTV3 350 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 PXKQ7Z7A4 578 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 RFLNBQ8N5W9 214 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 TM9SF4Q92544 642 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 C12orf43Q96C57 262 aaKnown RBP12.94□□□□□ -0.34
COL4A6-206ENST00000477085 OPALINQ96PE5 141 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 MGLLQ99685 303 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 SYT4Q9H2B2 425 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 MED29Q9NX70 200 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
COL4A6-206ENST00000477085 FAM166BA8MTA8 275 aa12.93□□□□□ -0.34
COL4A6-206ENST00000477085 TNFSF11O14788 317 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms