RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 PEX11AO75192 247 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 STX11O75558 287 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 UPK3AO75631 287 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 UGT2B17O75795 530 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 SEC14L2O76054 403 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 PRPH2P23942 346 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 GYS2P54840 703 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 LOXL3P58215 753 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 RPL15P61313 204 aaKnown RBP12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 ARF1P84077 181 aaKnown RBP12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 ZNF154Q13106 437 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 C2orf68Q2NKX9 166 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 GLIPR1L2Q4G1C9 344 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 ATP6AP1LQ52LC2 224 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 GKAP1Q5VSY0 366 aaPredicted RBP12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 TMEM154Q6P9G4 183 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 RNF165Q6ZSG1 346 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 CREB3L2Q70SY1 520 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 GPAT4Q86UL3 456 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 LRP11Q86VZ4 500 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 TMEM99Q8N816 258 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 PSMA8Q8TAA3 256 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 GTF3AQ92664 365 aaKnown RBP12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 TUBGCP3Q96CW5 907 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 PPP3R2Q96LZ3 170 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 SLC30A2Q9BRI3 323 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 MRI1Q9BV20 369 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 NUF2Q9BZD4 464 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 TUBB1Q9H4B7 451 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 SERHL2Q9H4I8 314 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 HINT3Q9NQE9 182 aaKnown RBP12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 C1orf109Q9NX04 203 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 FAM53CQ9NYF3 392 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 C1RLQ9NZP8 487 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 MYEF2Q9P2K5 600 aaKnown RBP12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 KCNE5Q9UJ90 142 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 TMED7Q9Y3B3 224 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 SLC22A23A1A5C7 686 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 ZNF503-AS2A6NEH8 195 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 AGAP5A6NIR3 686 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 CLPXO76031 633 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 TGDSO95455 350 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 PPIAL4GP0DN37 164 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 ZNF12P17014 697 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 CCT3P49368 545 aaKnown RBP12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 POLR2HP52434 150 aaKnown RBP12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 SELENOVP59797 346 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 KRTAP10-3P60369 221 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 GALK2Q01415 458 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 TP53BP2Q13625 1128 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 GPR68Q15743 365 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 NKPD1Q17RQ9 610 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 HFEQ30201 348 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 GALNTL6Q49A17 601 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 FAM209AQ5JX71 171 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 SAMD5Q5TGI4 173 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 NXNQ6DKJ4 435 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 TMEM225Q6GV28 225 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 NIPAL3Q6P499 406 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 MRAPQ8TCY5 172 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 MOAP1Q96BY2 351 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 PRDM13Q9H4Q3 707 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 CCDC134Q9H6E4 229 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 DUSP13Q9UII6 198 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 OSGIN1Q9UJX0 560 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 EPPK1P58107 5090 aaKnown RBP12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 DNAH3Q8TD57 4116 aa12.29□□□□□ -0.44
CSNK2B-207ENST00000475875 ARHGAP32A7KAX9 2087 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 TMEM72A0PK05 275 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 LIPT2A6NK58 231 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 DUXAA6NLW8 204 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 G3V4G9 280 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 AKAP10O43572 662 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 EDF1O60869 148 aaKnown RBP12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 AKR7A3O95154 331 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 IGHMP01871 453 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 GUSBP08236 651 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 TROVE2P10155 538 aaKnown RBP eCLIP12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 CCNA2P20248 432 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 RYKP34925 604 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 CCL8P80075 99 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 RELBQ01201 579 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 SLC3A1Q07837 685 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 MAD2L1Q13257 205 aaPredicted RBP12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 R3HCC1LQ7Z5L2 792 aaKnown RBP12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 FAM110DQ8TAY7 271 aaPredicted RBP12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 SFXN5Q8TD22 340 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 SNX33Q8WV41 574 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 FCRL1Q96LA6 429 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 C3orf30Q96M34 536 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 OR7D2Q96RA2 312 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 ZNF350Q9GZX5 532 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 DENND2DQ9H6A0 471 aaPredicted RBP12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 AKTIPQ9H8T0 292 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 MEAF6Q9HAF1 191 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 MMP26Q9NRE1 261 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 B3GNT2Q9NY97 397 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 RCE1Q9Y256 329 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 TMED5Q9Y3A6 229 aa12.28□□□□□ -0.44
CSNK2B-207ENST00000475875 CCL27Q9Y4X3 112 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms