RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 C22orf34Q6ZV56 151 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 CREB3L2Q70SY1 520 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 P4HA3Q7Z4N8 544 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 AMIGO2Q86SJ2 522 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PHC2Q8IXK0 858 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 TMEM123Q8N131 208 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 SLC43A2Q8N370 569 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 C10orf53Q8N6V4 93 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 CNEP1R1Q8N9A8 125 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF610Q8N9Z0 462 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 OR9Q2Q8NGE9 314 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 OR5J2Q8NH18 312 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 OR51A7Q8NH64 312 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PIGXQ8TBF5 258 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PYDC1Q8WXC3 89 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 POP5Q969H6 163 aaKnown RBP6.18□□□□□ -1.42
LIMD1-204ENST00000474665 OXGR1Q96P68 337 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 SF3B5Q9BWJ5 86 aaKnown RBP6.18□□□□□ -1.42
LIMD1-204ENST00000474665 SFXN3Q9BWM7 321 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 TAPBPLQ9BX59 468 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PRRG4Q9BZD6 226 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 KLHL4Q9C0H6 718 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 GP6Q9HCN6 339 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 NANSQ9NR45 359 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 PLSCR4Q9NRQ2 329 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 GLRX2Q9NS18 164 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 KLHL9Q9P2J3 617 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 RASD1Q9Y272 281 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 SIGLEC7Q9Y286 467 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 SAMHD1Q9Y3Z3 626 aaKnown RBP6.18□□□□□ -1.42
LIMD1-204ENST00000474665 AP4S1Q9Y587 144 aa6.18□□□□□ -1.42
LIMD1-204ENST00000474665 USF3Q68DE3 2245 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 HTR3EA5X5Y0 456 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 FAM90A27PA6NNH2 459 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 RNF212BA8MTL3 300 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 EFCAB9A8MZ26 197 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 C11orf98E9PRG8 122 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 PDLIM1O00151 329 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 CLOCKO15516 846 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 VAMP5O95183 116 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 CLDN14O95500 239 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 STAMBPO95630 424 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 CST1P01037 141 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 GASTP01350 101 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 IGFBP1P08833 259 aaPredicted RBP6.17□□□□□ -1.42
LIMD1-204ENST00000474665 ADORA3P0DMS8 318 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 CD8BP10966 210 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 IGFBP2P18065 325 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 PRKACGP22612 351 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 FPR3P25089 353 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 CCKARP32238 428 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 OR3A2P47893 321 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 SELENOPP49908 381 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 SMSP52788 366 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 SMIM11AP58511 58 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 RUNX1T1Q06455 604 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 MFSD13AQ14CX5 517 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 ATP6AP1Q15904 470 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 MICAQ29983 383 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 PHYHD1Q5SRE7 291 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 TMEM225Q6GV28 225 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 C1orf94Q6P1W5 598 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 LINGO2Q7L985 606 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 PXKQ7Z7A4 578 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 GALNT5Q7Z7M9 940 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 GPAT4Q86UL3 456 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 KIF18BQ86Y91 864 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 GABRG1Q8N1C3 465 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 OR6K3Q8NGY3 331 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 ASB5Q8WWX0 329 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 LRTOMTQ8WZ04 291 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 TMEM45BQ96B21 275 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 NMD3Q96D46 503 aaKnown RBP6.17□□□□□ -1.42
LIMD1-204ENST00000474665 ZHX1-C8orf76Q96EF9 292 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 RSRC1Q96IZ7 334 aaKnown RBP6.17□□□□□ -1.42
LIMD1-204ENST00000474665 PKP2Q99959 881 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 NAA11Q9BSU3 229 aaPredicted RBP6.17□□□□□ -1.42
LIMD1-204ENST00000474665 EMC6Q9BV81 110 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 C12orf49Q9H741 205 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 MED29Q9NX70 200 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 DNAJB9Q9UBS3 223 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 PRSS50Q9UI38 385 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 HIF3AQ9Y2N7 669 aa6.17□□□□□ -1.42
LIMD1-204ENST00000474665 NSD1Q96L73 2696 aaPredicted RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 UNC119BA6NIH7 251 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 MCIDASD6RGH6 385 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 BLOC1S5-TXNDC5H3BN57 136 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 GPR171O14626 319 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 DVL2O14641 736 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 MSTNO14793 375 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 OR10H3O60404 316 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 UPK3AO75631 287 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 SERPINI2O75830 405 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 PLGP00747 810 aaPredicted RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 IGHV3-9P01782 118 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 F13BP05160 661 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 SAGP10523 405 aaPredicted RBP6.16□□□□□ -1.42
LIMD1-204ENST00000474665 POU2F1P14859 743 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 IFNGR1P15260 489 aa6.16□□□□□ -1.42
LIMD1-204ENST00000474665 ZNF43P17038 809 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms