RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RPS6KB2Q9UBS0 482 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 REV1Q9UBZ9 1251 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 NOX1Q9Y5S8 564 aa12.06□□□□□ -0.48
CCDC78-209ENST00000474647 TMEM247A6NEH6 219 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF99A8MXY4 864 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-209ENST00000474647 FAM157AC9JC47 383 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 SLCO1B7G3V0H7 640 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 M0R082 166 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 AIM2O14862 343 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 HLA-HP01893 362 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 NR4A1P22736 598 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 ALDH3B1P43353 468 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 EGR4Q05215 589 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 PIGFQ07326 219 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 SCGB2A2Q13296 93 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 GSG1Q2KHT4 349 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 ELFN2Q5R3F8 820 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 PHYHD1Q5SRE7 291 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 GKAP1Q5VSY0 366 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-209ENST00000474647 OGFOD2Q6N063 350 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 CARM1Q86X55 608 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 C3orf56Q8N813 242 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 IL17RDQ8NFM7 739 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF417Q8TAU3 575 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF418Q8TF45 676 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-209ENST00000474647 SLC38A5Q8WUX1 472 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 MRPL24Q96A35 216 aaKnown RBP12.05□□□□□ -0.48
CCDC78-209ENST00000474647 TMEM19Q96HH6 336 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 LRRC37BQ96QE4 947 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 OR2M2Q96R28 347 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF587Q96SQ5 575 aaPredicted RBP12.05□□□□□ -0.48
CCDC78-209ENST00000474647 B3GAT1Q9P2W7 334 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 FZR1Q9UM11 496 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF232Q9UNY5 417 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 GRIP1Q9Y3R0 1128 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 SPEF1Q9Y4P9 236 aa12.05□□□□□ -0.48
CCDC78-209ENST00000474647 A0A0A6YYJ9 748 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 HPXP02790 462 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 MSMBP08118 114 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 NQO1P15559 274 aaKnown RBP12.04□□□□□ -0.48
CCDC78-209ENST00000474647 ACHEP22303 614 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 LSP1P33241 339 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 PTDSS1P48651 473 aaKnown RBP12.04□□□□□ -0.48
CCDC78-209ENST00000474647 GNGT1P63211 74 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 GALK2Q01415 458 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 MAD2L1BPQ15013 274 aaPredicted RBP12.04□□□□□ -0.48
CCDC78-209ENST00000474647 MSMPQ1L6U9 139 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 TRMT5Q32P41 509 aaKnown RBP12.04□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF311Q5JNZ3 666 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF813Q6ZN06 617 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 UEVLDQ8IX04 471 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 ZFAND2BQ8WV99 257 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 GCDHQ92947 438 aaPredicted RBP12.04□□□□□ -0.48
CCDC78-209ENST00000474647 SLC38A4Q969I6 547 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 SPATA9Q9BWV2 254 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 MS4A5Q9H3V2 200 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 TREM2Q9NZC2 230 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 CHST2Q9Y4C5 530 aa12.04□□□□□ -0.48
CCDC78-209ENST00000474647 A0A1W2PPW3 197 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 SDHDO14521 159 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 WNT9BO14905 357 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 HDAC3O15379 428 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 PPIHO43447 177 aaKnown RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 TRAF3IP2O43734 574 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 TGDSO95455 350 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 TFP02787 698 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 VIMP08670 466 aaKnown RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 GAAP10253 952 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 KITP10721 976 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 B4GALT1P15291 398 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 COL8A2P25067 703 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 GRPRP30550 384 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 MVDP53602 400 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 SEC24CP53992 1094 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 POU3F1Q03052 451 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 ALKBH6Q3KRA9 238 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 GTDC1Q4AE62 458 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 SLC9B1Q4ZJI4 515 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 FAM69AQ5T7M9 428 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 FAHD2BQ6P2I3 314 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 DEF8Q6ZN54 512 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 LRP11Q86VZ4 500 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 TMEM123Q8N131 208 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 OR51F2Q8NH61 342 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 RNF217Q8TC41 542 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 RDH5Q92781 318 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 TAAR8Q969N4 342 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 ZMYND19Q96E35 227 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 FAHD2AQ96GK7 314 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 EMC6Q9BV81 110 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 WDR55Q9H6Y2 383 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 TPT1P8Q9HAU6 139 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 ZNF275Q9NSD4 429 aaPredicted RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 FGFR1OP2Q9NVK5 253 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 MYEF2Q9P2K5 600 aaKnown RBP12.03□□□□□ -0.48
CCDC78-209ENST00000474647 PRDM4Q9UKN5 801 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 PCDHB10Q9UN67 800 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 IFT52Q9Y366 437 aa12.03□□□□□ -0.48
CCDC78-209ENST00000474647 GPR45Q9Y5Y3 372 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms