RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ANKRD34CP0C6C1 535 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 FCGR1AP12314 374 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 KITLGP21583 273 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CD72P21854 359 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 S100GP29377 79 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 BRS3P32247 399 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 UQCRFS1P47985 274 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GALCP54803 685 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TAS2R38P59533 333 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 RPS20P60866 119 aaKnown RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 BTG2P78543 158 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 UBE2V1Q13404 147 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZNF77Q15935 545 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 NOL9Q5SY16 702 aaKnown RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 MORN1Q5T089 497 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 IDNKQ5T6J7 187 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PRAMEF17Q5VTA0 474 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 HACD2Q6Y1H2 254 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GLDNQ6ZMI3 551 aaPredicted RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 GPRIN1Q7Z2K8 1008 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 APOBEC3FQ8IUX4 373 aaKnown RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 OR2AE1Q8NHA4 323 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CNOT9Q92600 299 aaKnown RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 MYLPFQ96A32 169 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SMIM8Q96KF7 97 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SORT1Q99523 831 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 HEYLQ9NQ87 328 aaPredicted RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 IL17RBQ9NRM6 502 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 FAM207AQ9NSI2 230 aaPredicted RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 FBXL12Q9NXK8 326 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MED11Q9P086 117 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 OR14J1Q9UGF5 321 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PSORS1C1Q9UIG5 152 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 NPIPA1Q9UND3 350 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 STYXL1Q9Y6J8 313 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZSWIM8A7E2V4 1837 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 LOC105369274A0A096LPK9 316 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 LOC102723532A0A0G2JNH3 316 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 DHRS7CA6NNS2 312 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 F5H768 121 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MPZL1O95297 269 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 IL18BPO95998 194 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TOMM40O96008 361 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MT-CO2P00403 227 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 AMY2AP04746 511 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CYBBP04839 570 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 DBHP09172 617 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CST2P09228 141 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 OR56A5P0C7T3 313 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 AMY2BP19961 511 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GATA3P23771 443 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SOX18P35713 384 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ARL4AP40617 200 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 QARSP47897 775 aaKnown RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 CPSF6Q16630 551 aaKnown RBP eCLIP3.16□□□□□ -1.9
UBR3-208ENST00000474426 NRF1Q16656 503 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZNF181Q2M3W8 571 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CBWD6Q4V339 395 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CBWD3Q5JTY5 395 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 FAM69BQ5VUD6 431 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CAPN13Q6MZZ7 669 aaPredicted RBP3.16□□□□□ -1.9
UBR3-208ENST00000474426 SLC23A3Q6PIS1 610 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SMARCD3Q6STE5 483 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CD300LDQ6UXZ3 194 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 OLIG3Q7RTU3 272 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 COMMD2Q86X83 199 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 OR4N4Q8N0Y3 316 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MMGT1Q8N4V1 131 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 UBAC2Q8NBM4 344 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MDS2Q8NDY4 140 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 OR4C6Q8NH72 309 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 OR5R1Q8NH85 324 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ADAMTS17Q8TE56 1095 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZFP3Q96NJ6 502 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 AMBRA1Q9C0C7 1298 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 CTDSP1Q9GZU7 261 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 C20orf85Q9H1P6 137 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 BOLA2Q9H3K6 86 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SRMSQ9H3Y6 488 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PCIF1Q9H4Z3 704 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZNF576Q9H609 170 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 IL1RL2Q9HB29 575 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TMEM27Q9HBJ8 222 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 B3GAT2Q9NPZ5 323 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PCYOX1Q9UHG3 505 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 A3GALT2U3KPV4 340 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 HEG1Q9ULI3 1381 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 GRIN2BQ13224 1484 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 OVOS2A0A0J9YW53 1432 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 OVOS2Q6IE36 1432 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 ZMYM4Q5VZL5 1548 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TBC1D3DA0A087WVF3 549 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MEIKINA0A087WXM9 373 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 IGSF23A1L1A6 192 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 SEC14L6B5MCN3 397 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 TBC1D3LB9A6J9 549 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MSH4O15457 936 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 FGF16O43320 207 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 PDE6DO43924 150 aa3.16□□□□□ -1.9
UBR3-208ENST00000474426 MMP23AO75900 390 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms