RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 GPR52Q9Y2T5 361 aa10.97□□□□□ -0.65
DDX56-209ENST00000473924 SETXQ7Z333 2677 aaKnown RBP10.96□□□□□ -0.65
DDX56-209ENST00000473924 TRAV27A0A087WT01 109 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 A0A1W2PRG6 482 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 TCRBV3S1A0A5B6 114 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 CIB4A0PJX0 185 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 SLC35F4A4IF30 521 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 MCIDASD6RGH6 385 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 CST1P01037 141 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 F13BP05160 661 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 IFNGR1P15260 489 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 PPP3CBP16298 524 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 IGHV1-2P23083 117 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 CCKARP32238 428 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 IFNGR2P38484 337 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 AQP2P41181 271 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 SLC9A3P48764 834 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 BIDP55957 195 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 LAPTM4AQ15012 233 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 SEC23BQ15437 767 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 TSC22D1Q15714 1073 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 ANKDD1AQ495B1 522 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 ALG10Q5BKT4 473 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 C9orf135Q5VTT2 229 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 CARD17Q5XLA6 110 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 SLC35D2Q76EJ3 337 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 BHLHA15Q7RTS1 189 aaPredicted RBP10.96□□□□□ -0.65
DDX56-209ENST00000473924 GPR137CQ8N3F9 429 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 OR13C2Q8NGS9 318 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 MOSPD2Q8NHP6 518 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 FAM222BQ8WU58 562 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 ZC3HAV1LQ96H79 300 aaKnown RBP10.96□□□□□ -0.65
DDX56-209ENST00000473924 WFIKKN1Q96NZ8 548 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 OR2M2Q96R28 347 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 NDEL1Q9GZM8 345 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 ACTR6Q9GZN1 396 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 TAS2R16Q9NYV7 291 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 MALT1Q9UDY8 824 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 KCNN3Q9UGI6 736 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 HIF3AQ9Y2N7 669 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 LYVE1Q9Y5Y7 322 aa10.96□□□□□ -0.65
DDX56-209ENST00000473924 FREM1Q5H8C1 2179 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 ZNF587BE7ETH6 402 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 CDC42EP2O14613 210 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 CLOCKO15516 846 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 ZNF432O94892 652 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 BCL10O95999 233 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 EPXP11678 715 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 CDH2P19022 906 aaPredicted RBP10.95□□□□□ -0.66
DDX56-209ENST00000473924 OMPP47874 163 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 DAP3P51398 398 aaKnown RBP10.95□□□□□ -0.66
DDX56-209ENST00000473924 PRPS1P60891 318 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 TGFBR3Q03167 851 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 PPP1R8Q12972 351 aaKnown RBP10.95□□□□□ -0.66
DDX56-209ENST00000473924 CAMK2DQ13557 499 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 MELKQ14680 651 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 STK11Q15831 433 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 ZBED5Q49AG3 693 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 ALKBH2Q6NS38 261 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 HMBOX1Q6NT76 420 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 LINC00471Q8N535 108 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 ZNF433Q8N7K0 673 aaPredicted RBP10.95□□□□□ -0.66
DDX56-209ENST00000473924 OR6N1Q8NGY5 312 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 S100PBPQ96BU1 408 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 ADAD1Q96M93 576 aaKnown RBP10.95□□□□□ -0.66
DDX56-209ENST00000473924 DACH2Q96NX9 599 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 ALKBH3Q96Q83 286 aaPredicted RBP10.95□□□□□ -0.66
DDX56-209ENST00000473924 TNFRSF13CQ96RJ3 184 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 FUZQ9BT04 418 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 LINC00470Q9BZP3 86 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 OR10A4Q9H209 315 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 B3GAT2Q9NPZ5 323 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 ZNF226Q9NYT6 803 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 SAMHD1Q9Y3Z3 626 aaKnown RBP10.95□□□□□ -0.66
DDX56-209ENST00000473924 U3KQV3 271 aa10.95□□□□□ -0.66
DDX56-209ENST00000473924 UNC119BA6NIH7 251 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 M0R3G1 203 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 FKBP6O75344 327 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 UPK3AO75631 287 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 RAD51DO75771 328 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 CCNB2O95067 398 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 TSPAN19P0C672 248 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 COX5AP20674 150 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 MPGP29372 298 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 RPL4P36578 427 aaKnown RBP10.94□□□□□ -0.66
DDX56-209ENST00000473924 HMGA2P52926 109 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 CTXN1P60606 82 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 RPS4XP62701 263 aaKnown RBP10.94□□□□□ -0.66
DDX56-209ENST00000473924 ROR2Q01974 943 aaKnown RBP10.94□□□□□ -0.66
DDX56-209ENST00000473924 LGALS3BPQ08380 585 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 FBXW10Q5XX13 1052 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 HDDC2Q7Z4H3 204 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 IGFN1Q86VF2 1251 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 TMEM123Q8N131 208 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 OR6X1Q8NH79 312 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 GNPDA2Q8TDQ7 276 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 ZNF566Q969W8 418 aa10.94□□□□□ -0.66
DDX56-209ENST00000473924 USB1Q9BQ65 265 aaKnown RBP10.94□□□□□ -0.66
DDX56-209ENST00000473924 CCM2LQ9NUG4 571 aaPredicted RBP10.94□□□□□ -0.66
DDX56-209ENST00000473924 E2F6O75461 281 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms