RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 NPIPA8P0DM63 369 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 TFPIP10646 304 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 APEHP13798 732 aaKnown RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF26P17031 533 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 SDC1P18827 310 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 EFNA1P20827 205 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 PRPH2P23942 346 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 IGFBP5P24593 272 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 APOBEC3AP31941 199 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 HPCAL1P37235 193 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 RPL3P39023 403 aaKnown RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 FRKP42685 505 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 ASMTP46597 345 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 DIO1P49895 249 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 NUDT2P50583 147 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 TPTEP56180 551 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 RPL38P63173 70 aaKnown RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 PHC1P78364 1004 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 SRSF2Q01130 221 aaKnown RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 SPOCK1Q08629 439 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 KLF10Q13118 480 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 MLC1Q15049 377 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 QPRTQ15274 297 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 CARTPTQ16568 116 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 NDUFAF6Q330K2 333 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 RFTN2Q52LD8 501 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF385BQ569K4 471 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 SAMD4BQ5PRF9 694 aaKnown RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 FAM120AOSQ5T036 256 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 GPR107Q5VW38 600 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 CLEC6AQ6EIG7 209 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 FAM122CQ6P4D5 195 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF773Q6PK81 442 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 HACD2Q6Y1H2 254 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 FRMD7Q6ZUT3 714 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 AQP12AQ8IXF9 295 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF786Q8N393 782 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 DHRSXQ8N5I4 330 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 ZNF433Q8N7K0 673 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 LSMEM1Q8N8F7 131 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 PLPP7Q8NBV4 271 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 BHLHE22Q8NFJ8 381 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 OR5W2Q8NH69 310 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 GPR119Q8TDV5 335 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 TMEM234Q8WY98 164 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 TFAP2CQ92754 450 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 C3orf49Q96BT1 292 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 MTERF3Q96E29 417 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 PIMREGQ9BSJ6 248 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 TRMOQ9BU70 441 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 C1QTNF6Q9BXI9 259 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 ACTRT3Q9BYD9 372 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 NEK6Q9HC98 313 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 TCF7L2Q9NQB0 619 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 TPSG1Q9NRR2 321 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 TAS2R16Q9NYV7 291 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 ING1Q9UK53 422 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 FIS1Q9Y3D6 152 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 SPEF1Q9Y4P9 236 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 SPIN1Q9Y657 262 aaPredicted RBP6.08□□□□□ -1.44
CKS1B-205ENST00000473344 A3GALT2U3KPV4 340 aa6.08□□□□□ -1.44
CKS1B-205ENST00000473344 RTTNQ86VV8 2226 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 TRPC5OSA6NMA1 111 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 M0R3G1 203 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 GPR171O14626 319 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 CFLARO15519 480 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 LY6HO94772 140 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 TGFAP01135 160 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 UMPSP11172 480 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 CTRB1P17538 263 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 PGCP20142 388 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 EDNRAP25101 427 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 MAPK1P28482 360 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 SERPINB5P36952 375 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 CAPGP40121 348 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 CCT3P49368 545 aaKnown RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 IDH3AP50213 366 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 PDLIM4P50479 330 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 PPP5CP53041 499 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 AP2S1P53680 142 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 ABCE1P61221 599 aaKnown RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 SNRPD2P62316 118 aaKnown RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 MRPS15P82914 257 aaKnown RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 TGFBR3Q03167 851 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 MERTKQ12866 999 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 BNIP2Q12982 314 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 PDE7AQ13946 482 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 TRIM25Q14258 630 aaKnown RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 RAB39AQ14964 217 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 DUSP7Q16829 419 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 IQCCQ4KMZ1 466 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 SYT14P1Q58G82 188 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 SLC25A53Q5H9E4 307 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 RSBN1Q5VWQ0 802 aaPredicted RBP6.07□□□□□ -1.44
CKS1B-205ENST00000473344 CTRB2Q6GPI1 263 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 OGFOD2Q6N063 350 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 BHLHB9Q6PI77 547 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 KLHL24Q6TFL4 600 aa6.07□□□□□ -1.44
CKS1B-205ENST00000473344 ZYG11AQ6WRX3 759 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms