RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, human

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-226	ENST00000473066	TNFRSF1B	P20333	461 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	KDELR2	P33947	212 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	NUDT2	P50583	147 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	FABP6	P51161	128 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	CRYBA2	P53672	197 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	ARF1	P84077	181 aa	Known RBP	13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	LTB	Q06643	244 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZNF74	Q16587	644 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	CEACAM16	Q2WEN9	425 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	LINC00114	Q6XXX2	140 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	WDR88	Q6ZMY6	472 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	PXK	Q7Z7A4	578 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	DTX2	Q86UW9	622 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	BOD1	Q96IK1	185 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	HOPX	Q9BPY8	73 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	BARX1	Q9HBU1	254 aa	Predicted RBP	13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	CRLF2	Q9HC73	371 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	GPR35	Q9HC97	309 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	MED29	Q9NX70	200 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZNF229	Q9UJW7	825 aa		13.64	□□□□□ -0.23
MRPL55-226	ENST00000473066	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	SLC35F4	A4IF30	521 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	MS4A18	H0YCH9	400 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	RPL36A-HNRNPH2	H7BZ11	118 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	PLPP3	O14495	311 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	RNF13	O43567	381 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	CRYAA	P02489	173 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	HLA-DOB	P13765	273 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	RBM34	P42696	430 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	CAPZA2	P47755	286 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	SLC7A2	P52569	658 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	LIPE	Q05469	1076 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	PGGHG	Q32M88	737 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	MS4A18	Q3C1V0	323 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZNF544	Q6NX49	715 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	LINGO2	Q7L985	606 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	CPLX4	Q7Z7G2	160 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	TMEM123	Q8N131	208 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	MUC15	Q8N387	334 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	BCL2L2	Q92843	193 aa	Predicted RBP	13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	CMTM5	Q96DZ9	223 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	ADAD1	Q96M93	576 aa	Known RBP	13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	SLC38A2	Q96QD8	506 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	EMC6	Q9BV81	110 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	ULBP2	Q9BZM5	246 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	CBLN4	Q9NTU7	201 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	POFUT2	Q9Y2G5	429 aa		13.63	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZNF99	A8MXY4	864 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066		E7EQL1	145 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	ATP6V1G2-DDX39B	F2Z307	99 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	OVOL3	O00110	214 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	SHOX2	O60902	331 aa	Predicted RBP	13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	LYPD3	O95274	346 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	THRB	P10828	461 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	BMP4	P12644	408 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	TTK	P33981	857 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	OR1E2	P47887	323 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	CSNK1A1	P48729	337 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	TUBA1B	P68363	451 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	TUBA4A	P68366	448 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	CAMK2D	Q13557	499 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	HACD2	Q6Y1H2	254 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	TUBA1A	Q71U36	451 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	C20orf196	Q8IYI0	205 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	NANOS1	Q8WY41	292 aa	Known RBP	13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	COX4I2	Q96KJ9	171 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	LRR1	Q96L50	414 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	GRIP2	Q9C0E4	1043 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	CMTM6	Q9NX76	183 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	RIMS3	Q9UJD0	308 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	MTOR	P42345	2549 aa		13.62	□□□□□ -0.23
MRPL55-226	ENST00000473066	TRIM64	A6NGJ6	449 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	TRIM64B	A6NI03	449 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	MCIDAS	D6RGH6	385 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	CXCR6	O00574	342 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	SMAD7	O15105	426 aa	Known RBP	13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	ENTPD5	O75356	428 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	SEC14L2	O76054	403 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	ZNF682	O95780	498 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	MT-ND1	P03886	318 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	THY1	P04216	161 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	IFNW1	P05000	195 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	IFNGR1	P15260	489 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	SEC24C	P53992	1094 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	BID	P55957	195 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	SELENOW	P63302	87 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	CHRNB3	Q05901	458 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	ST3GAL3	Q11203	375 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	CLEC12B	Q2HXU8	276 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	B3GLCT	Q6Y288	498 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	SLC35D2	Q76EJ3	337 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	HDDC2	Q7Z4H3	204 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	SLC15A3	Q8IY34	581 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	CCDC36	Q8IYA8	594 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	TMEM239	Q8WW34	195 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	SGTB	Q96EQ0	304 aa		13.61	□□□□□ -0.23
MRPL55-226	ENST00000473066	PRRC1	Q96M27	445 aa		13.61	□□□□□ -0.23

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