RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 SH3YL1Q96HL8 342 aaPredicted RBP0.72□□□□□ -2.29
COMMD3-209ENST00000471350 NIPSNAP3BQ9BS92 247 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 TIMM29Q9BSF4 260 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 TUBGCP2Q9BSJ2 902 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 ZSCAN5AQ9BUG6 496 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 CHAC1Q9BUX1 264 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 LHX5Q9H2C1 402 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 REEP4Q9H6H4 257 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 RNF167Q9H6Y7 350 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 MRPL47Q9HD33 250 aaKnown RBP0.72□□□□□ -2.29
COMMD3-209ENST00000471350 ISYNA1Q9NPH2 558 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 EXD2Q9NVH0 621 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 ATXN10Q9UBB4 475 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 XCL2Q9UBD3 114 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 IL19Q9UHD0 177 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 TMCO1Q9UM00 188 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 AK6Q9Y3D8 172 aaKnown RBP0.72□□□□□ -2.29
COMMD3-209ENST00000471350 PCM1Q15154 2024 aa0.72□□□□□ -2.29
COMMD3-209ENST00000471350 NLRC5Q86WI3 1866 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 IGHV3-74A0A0B4J1X5 117 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 VGLL3A8MV65 326 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 CCER2I3L3R5 266 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 FOXE1O00358 373 aaPredicted RBP0.71□□□□□ -2.3
COMMD3-209ENST00000471350 KMOO15229 486 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 IGLV6-57P01721 117 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 GAPDHP04406 335 aaKnown RBP0.71□□□□□ -2.3
COMMD3-209ENST00000471350 FOLR1P15328 257 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 HPCAL1P37235 193 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 CSNK1A1P48729 337 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 SLC11A1P49279 550 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 CRYBB1P53674 252 aaPredicted RBP0.71□□□□□ -2.3
COMMD3-209ENST00000471350 RPS11P62280 158 aaKnown RBP eCLIP0.71□□□□□ -2.3
COMMD3-209ENST00000471350 ZNF616Q08AN1 781 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 PDIA2Q13087 525 aaKnown RBP0.71□□□□□ -2.3
COMMD3-209ENST00000471350 IFT88Q13099 833 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 TPGS2Q68CL5 300 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 FAM71F2Q6NXP2 309 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 NTM-AS1Q6ZSK4 140 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 LINC00336Q6ZUF6 198 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 PGAP1Q75T13 922 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 KIAA1328Q86T90 577 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 CALHM1Q8IU99 346 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 C1orf64Q8NEQ6 169 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 TESK2Q96S53 571 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 RAB34Q9BZG1 259 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 PARP12Q9H0J9 701 aaKnown RBP0.71□□□□□ -2.3
COMMD3-209ENST00000471350 SYNDIG1Q9H7V2 258 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 C12orf10Q9HB07 376 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 POPDC2Q9HBU9 364 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 MCCC2Q9HCC0 563 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 DDX19AQ9NUU7 478 aaKnown RBP0.71□□□□□ -2.3
COMMD3-209ENST00000471350 CALYQ9NYX4 217 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 SPATA7Q9P0W8 599 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 GNG12Q9UBI6 72 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 CTSFQ9UBX1 484 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 CDH9Q9ULB4 789 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 RASD1Q9Y272 281 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 GSTK1Q9Y2Q3 226 aa0.71□□□□□ -2.3
COMMD3-209ENST00000471350 F11RQ9Y624 299 aaKnown RBP0.71□□□□□ -2.3
COMMD3-209ENST00000471350 GPATCH8Q9UKJ3 1502 aaKnown RBP0.7□□□□□ -2.3
COMMD3-209ENST00000471350 LGALS9O00182 355 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 SDHDO14521 159 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 ZNF207O43670 478 aaKnown RBP0.7□□□□□ -2.3
COMMD3-209ENST00000471350 OR4F21O95013 312 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 IGHDP01880 384 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 OPN1MWP04001 364 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 HLA-DPB1P04440 258 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 BCHEP06276 602 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 ARL14EPLP0DKL9 152 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 OPN1MW2P0DN77 364 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 OPN1MW3P0DN78 364 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 IL1RNP18510 177 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 NPR2P20594 1047 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 NUCB2P80303 420 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 ACVR1Q04771 509 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 NCBP1Q09161 790 aaKnown RBP0.7□□□□□ -2.3
COMMD3-209ENST00000471350 TCP10Q12799 353 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 PLD1Q13393 1074 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 AQP6Q13520 282 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 SMUG1Q53HV7 270 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 BEND3Q5T5X7 828 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 HCP5Q6MZN7 132 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 ZNF493Q6ZR52 646 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 RABEPKQ7Z6M1 372 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 PRSS58Q8IYP2 241 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 ACOT4Q8N9L9 421 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 OR13G1Q8NGZ3 307 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 COQ8AQ8NI60 647 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 LINC01560Q8TB33 94 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 ABHD3Q8WU67 409 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 SDR42E1Q8WUS8 393 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 MAIP1Q8WWC4 291 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 CREB3L1Q96BA8 519 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 C7orf34Q96L11 122 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 WFIKKN1Q96NZ8 548 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 STACQ99469 402 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 TM2D3Q9BRN9 247 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 ACAT2Q9BWD1 397 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 OSBPL10Q9BXB5 764 aa0.7□□□□□ -2.3
COMMD3-209ENST00000471350 CAPS2Q9BXY5 557 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms