RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SELENOIQ9C0D9 397 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 METTL7AQ9H8H3 244 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 SH2D2AQ9NP31 389 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 BFARQ9NZS9 450 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 BTNL2Q9UIR0 455 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 CFAP54Q96N23 3096 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 PLCH1Q4KWH8 1693 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 PHRF1Q9P1Y6 1649 aaKnown RBP3.55□□□□□ -1.84
LSM5-209ENST00000468872 PLXNC1O60486 1568 aa3.55□□□□□ -1.84
LSM5-209ENST00000468872 ADGRB3O60242 1522 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 DCCP43146 1447 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 PLEKHG2Q9H7P9 1386 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 TMEM2Q9UHN6 1383 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 RGPD3A6NKT7 1758 aaPredicted RBP3.54□□□□□ -1.84
LSM5-209ENST00000468872 RGPD4Q7Z3J3 1758 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 A6NIZ1 184 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 MMP23AO75900 390 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 GAPDHP04406 335 aaKnown RBP3.54□□□□□ -1.84
LSM5-209ENST00000468872 ETS2P15036 469 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 CD1EP15812 388 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 MX1P20591 662 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 CXCR2P25025 360 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 GSSP48637 474 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 CDH4P55283 916 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 RAP1BP61224 184 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 LYZP61626 148 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 MICBQ29980 383 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 DEFB115Q30KQ5 88 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 PARP15Q460N3 678 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 CCDC14Q49A88 953 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 CTSL3PQ5NE16 218 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 NBPF5PQ86XG9 351 aaPredicted RBP3.54□□□□□ -1.84
LSM5-209ENST00000468872 ECHDC2Q86YB7 292 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 ERI1Q8IV48 349 aaKnown RBP3.54□□□□□ -1.84
LSM5-209ENST00000468872 NKAPP1Q8N9T2 125 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 ZNF740Q8NDX6 193 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 FRAT1Q92837 279 aaPredicted RBP3.54□□□□□ -1.84
LSM5-209ENST00000468872 NUS1Q96E22 293 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 C12orf42Q96LP6 360 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 HIST1H4GQ99525 98 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 C20orf85Q9H1P6 137 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 AZI2Q9H6S1 392 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 AIG1Q9NVV5 245 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 SUN2Q9UH99 717 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 NAP1L2Q9ULW6 460 aaPredicted RBP3.54□□□□□ -1.84
LSM5-209ENST00000468872 TMCO1Q9UM00 188 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 TNRC6CQ9HCJ0 1690 aaKnown RBP3.54□□□□□ -1.84
LSM5-209ENST00000468872 LAMC1P11047 1609 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 LMTK2Q8IWU2 1503 aa3.54□□□□□ -1.84
LSM5-209ENST00000468872 KANK1Q14678 1352 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 PIK3C2AO00443 1686 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 LRRC37A3O60309 1634 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 RAI1Q7Z5J4 1906 aaPredicted RBP3.53□□□□□ -1.84
LSM5-209ENST00000468872 NSG1A0A0A6YYJ2 146 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 A0A1W2PPE3 182 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 KLLNB2CW77 178 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 LOC110117498-PIK3R3F6TDL0 507 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 UBXN8O00124 270 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 HAS3O00219 553 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 ATP1B2P14415 290 aaPredicted RBP3.53□□□□□ -1.84
LSM5-209ENST00000468872 NCF2P19878 526 aaPredicted RBP3.53□□□□□ -1.84
LSM5-209ENST00000468872 IL12AP29459 219 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 KIR2DS4P43632 304 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 ACTR3P61158 418 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 SELENOTP62341 195 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 TGFBR3Q03167 851 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 LRRC74AQ0VAA2 488 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 OR5I1Q13606 314 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 IMMTQ16891 758 aaKnown RBP3.53□□□□□ -1.84
LSM5-209ENST00000468872 C6orf226Q5I0X4 101 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 C1orf100Q5SVJ3 147 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 TIGD3Q6B0B8 471 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 H2BFWTQ7Z2G1 175 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 SLC26A11Q86WA9 606 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 CCDC71LQ8N9Z2 235 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 OR2L5Q8NG80 312 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 OR51S1Q8NGJ8 323 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.53□□□□□ -1.84
LSM5-209ENST00000468872 RPUSD4Q96CM3 377 aaKnown RBP3.53□□□□□ -1.84
LSM5-209ENST00000468872 PHYHIPLQ96FC7 376 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 ZNF641Q96N77 438 aaPredicted RBP3.53□□□□□ -1.84
LSM5-209ENST00000468872 FMO2Q99518 471 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 TSG101Q99816 390 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 CHRDL1Q9BU40 450 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 POLR2J2Q9GZM3 115 aaKnown RBP3.53□□□□□ -1.84
LSM5-209ENST00000468872 POLR2J3Q9H1A7 115 aaKnown RBP3.53□□□□□ -1.84
LSM5-209ENST00000468872 RNF167Q9H6Y7 350 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 NMRAL1Q9HBL8 299 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 KCNIP3Q9Y2W7 256 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 NPTNQ9Y639 398 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 NRXN1Q9ULB1 1477 aa3.53□□□□□ -1.84
LSM5-209ENST00000468872 COL24A1Q17RW2 1714 aa3.53□□□□□ -1.85
LSM5-209ENST00000468872 FMN2Q9NZ56 1722 aa3.53□□□□□ -1.85
LSM5-209ENST00000468872 NOS1P29475 1434 aa3.53□□□□□ -1.85
LSM5-209ENST00000468872 TOPAZ1Q8N9V7 1692 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 SPTBN4Q9H254 2564 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 A0A0U1RQS6 177 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 XKRY2A2RUG3 117 aa3.52□□□□□ -1.85
LSM5-209ENST00000468872 PSMB11A5LHX3 300 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms