RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ALKBH1Q13686 389 aaKnown RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 GALEQ14376 348 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 LRRC37A5PQ49AS3 106 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 EMC4Q5J8M3 183 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 METTL11BQ5VVY1 283 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 NIPAL3Q6P499 406 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 SFXN4Q6P4A7 337 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 SLC16A14Q7RTX9 510 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 LAX1Q8IWV1 398 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 MFSD8Q8NHS3 518 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 ST8SIA1Q92185 356 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF775Q96BV0 537 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 CDC6Q99741 560 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 HCAR1Q9BXC0 346 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 MMP28Q9H239 520 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 FKRPQ9H9S5 495 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 hCG_1807616A0A1W2PRN6 198 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 NKX2-2O95096 273 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 SERPINA5P05154 406 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 CNN3Q15417 329 aaKnown RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 GLYR1Q49A26 553 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ZMAT1Q5H9K5 638 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 DRAXINQ8NBI3 349 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 SORCS2Q96PQ0 1159 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 TMEM246Q9BRR3 403 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 SEMA4CQ9C0C4 833 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 PAQR5Q9NXK6 330 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ZNF226Q9NYT6 803 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 TMEFF2Q9UIK5 374 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 TMEM184BQ9Y519 407 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 MTCH2Q9Y6C9 303 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ZNF638Q14966 1978 aaKnown RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ASCC3Q8N3C0 2202 aaKnown RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ICOSLGO75144 302 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 NCR1O76036 304 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ZNF35P13682 527 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ETV5P41161 510 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ETV1P50549 477 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 CARD18P57730 90 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 LINC00696Q6ZRV3 163 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 CARFQ8N187 725 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 CSNK2A3Q8NEV1 391 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 COQ8AQ8NI60 647 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 FAM86C1Q9NVL1 165 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 MGAT4AQ9UM21 535 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ADAM23O75077 832 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ENPP1P22413 925 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 SDHAP31040 664 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 SNU13P55769 128 aaKnown RBP12.64□□□□□ -0.39
BRAT1-203ENST00000467558 NXPH1P58417 271 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 RELAQ04206 551 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 MESP2Q0VG99 397 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ZIC1Q15915 447 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 BEST3Q8N1M1 668 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 C8orf44Q96CB5 159 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 CCDC74BQ96LY2 380 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 POU2F3Q9UKI9 436 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 ALG5Q9Y673 324 aa12.64□□□□□ -0.39
BRAT1-203ENST00000467558 HRGP04196 525 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 SFTPBP07988 381 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 AKAIN1P0CW23 69 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 HIST1H1CP16403 213 aaKnown RBP12.63□□□□□ -0.39
BRAT1-203ENST00000467558 MAN2A2P49641 1150 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 FGL1Q08830 312 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 SLC22A6Q4U2R8 563 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 VASH1Q7L8A9 365 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-203ENST00000467558 OR14A2Q96R54 314 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 A4GNTQ9UNA3 340 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 ADAM18Q9Y3Q7 739 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 TET1Q8NFU7 2136 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 IGHV1OR21-1A0A087WYE8 117 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 PIGBOS1A0A0B4J2F0 54 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 OR2W5A6NFC9 320 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 VAMP5O95183 116 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 SNRPBP14678 240 aaKnown RBP12.63□□□□□ -0.39
BRAT1-203ENST00000467558 AGTR1P30556 359 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 GNRHRP30968 328 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 EVI2BP34910 448 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 FAM57BQ71RH2 274 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 ZNF471Q9BX82 626 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-203ENST00000467558 PLEKHJ1Q9NW61 149 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 H7C417 338 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 RP2O75695 350 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 AKR1C4P17516 323 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 NKPD1Q17RQ9 610 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 USP51Q70EK9 711 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 KDM8Q8N371 416 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 CPT1CQ8TCG5 803 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 ARHGDIGQ99819 225 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 SYT3Q9BQG1 590 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 IER2Q9BTL4 223 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 NOX4Q9NPH5 578 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
BRAT1-203ENST00000467558 TMEM265A0A087WTH1 108 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 KLRC4-KLRK1H3BQV0 150 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 SELENOFO60613 162 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 HOXB3P14651 431 aaPredicted RBP12.63□□□□□ -0.39
BRAT1-203ENST00000467558 DIO1P49895 249 aa12.63□□□□□ -0.39
BRAT1-203ENST00000467558 GRAMD2AQ8IUY3 354 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms