RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ZKSCAN8Q15776 578 aaPredicted RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 MICAQ29983 383 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 KLHL40Q2TBA0 621 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 CCDC40Q4G0X9 1142 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 AGKQ53H12 422 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 ACER2Q5QJU3 275 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 LIPKQ5VXJ0 399 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 CNSTQ6PJW8 725 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 DPY19L2P2Q6ZN68 376 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 TMEM135Q86UB9 458 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 TAC4Q86UU9 113 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 LUZP1Q86V48 1076 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 ZSCAN30Q86W11 494 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 AMZ2Q86W34 360 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 PYROXD2Q8N2H3 581 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 ATP6V0D2Q8N8Y2 350 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 OR52K2Q8NGK3 314 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 DQX1Q8TE96 717 aaKnown RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 RAB3CQ96E17 227 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 BTN2A3PQ96KV6 586 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 SERPINB11Q96P15 392 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 RPRD1AQ96P16 312 aaPredicted RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 WRAP53Q9BUR4 548 aaKnown RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 ZSCAN16Q9H4T2 348 aaPredicted RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 IKZF5Q9H5V7 419 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 SUDS3Q9H7L9 328 aaPredicted RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 ADGRL4Q9HBW9 690 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 MRPL40Q9NQ50 206 aaKnown RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 IMPAD1Q9NX62 359 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 COX16Q9P0S2 106 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 CGNQ9P2M7 1197 aaKnown RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 MIOXQ9UGB7 285 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 EMCNQ9ULC0 261 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 VANGL2Q9ULK5 521 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 MOKQ9UQ07 419 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 HS3ST2Q9Y278 367 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 FADS3Q9Y5Q0 445 aa2.34□□□□□ -2.03
XRN1-206ENST00000467077 MRPS18BQ9Y676 258 aaKnown RBP2.34□□□□□ -2.03
XRN1-206ENST00000467077 VPS13CQ709C8 3753 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 A0A0D9SEW6 157 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 RNF103-CHMP3A0A140T963 221 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 HEATR9A2RTY3 570 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 KRT87PA6NCN2 255 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 M0QYV0 167 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 DPM1O60762 260 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CLDN11O75508 207 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 LYPD3O95274 346 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 GOT2P00505 430 aaKnown RBP2.33□□□□□ -2.04
XRN1-206ENST00000467077 MT-ATP6P00846 226 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 PCCBP05166 539 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 FGF1P05230 155 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 RHOCP08134 193 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 SNRPCP09234 159 aaKnown RBP2.33□□□□□ -2.04
XRN1-206ENST00000467077 SLC2A3P11169 496 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 KRT13P13646 458 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CD1CP29017 333 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 PTPN4P29074 926 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CASP1P29466 404 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 OR1E1P30953 314 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CASP14P31944 242 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 SAA4P35542 130 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CCNHP51946 323 aaPredicted RBP2.33□□□□□ -2.04
XRN1-206ENST00000467077 CDH4P55283 916 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 RAG2P55895 527 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 IL1RL1Q01638 556 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 NME3Q13232 169 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 GAMTQ14353 236 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 SLC10A1Q14973 349 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CARD16Q5EG05 197 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 C1orf220Q5T0J3 134 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 SYPL2Q5VXT5 272 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 SPECC1LQ69YQ0 1117 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 PMF1Q6P1K2 205 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 C22orf39Q6P5X5 142 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 IGFL2Q6UWQ7 119 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 C2orf66Q6UXQ4 117 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 TMEM26Q6ZUK4 368 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 C12orf56Q8IXR9 622 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 MLKLQ8NB16 471 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 DENND6BQ8NEG7 585 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 ZNF397Q8NF99 534 aaPredicted RBP2.33□□□□□ -2.04
XRN1-206ENST00000467077 OR4D9Q8NGE8 314 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 OR56A4Q8NGH8 313 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 OR6K2Q8NGY2 324 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CCL4L1Q8NHW4 92 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CXorf40AQ8TE69 158 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 RAB7BQ96AH8 199 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 FAF2Q96CS3 445 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 C19orf60Q96EN9 201 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 PDXPQ96GD0 296 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 CPXM1Q96SM3 734 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 C19orf43Q9BQ61 176 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 APOOQ9BUR5 198 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 TRIM62Q9BVG3 475 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 ULBP3Q9BZM4 244 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 TM6SF2Q9BZW4 377 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 HSD3B7Q9H2F3 369 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 BLZF1Q9H2G9 400 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 APMAPQ9HDC9 416 aa2.33□□□□□ -2.04
XRN1-206ENST00000467077 FBXO8Q9NRD0 319 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms