RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZNF813Q6ZN06 617 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CLEC14AQ86T13 490 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 GCNT2Q8N0V5 402 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ASB16Q96NS5 453 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 NOX3Q9HBY0 568 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 TLCD2A6NGC4 264 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 PRAMEF25A6NGN4 478 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 RAB27BO00194 218 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 IMPA2O14732 288 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 AOAHP28039 575 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CTGFP29279 349 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 OPRD1P41143 372 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ETV6P41212 452 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HNF4GQ14541 408 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 PAGE3Q5JUK9 113 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ESPNLQ6ZVH7 1005 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 FJX1Q86VR8 437 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 BPIFB2Q8N4F0 458 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 OR13C2Q8NGS9 318 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 OR2T35Q8NGX2 323 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ZNF480Q8WV37 535 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ELP4Q96EB1 424 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HRASLS5Q96KN8 279 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CNTNAP3Q9BZ76 1288 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 PRDM9Q9NQV7 894 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 MRPS34P82930 218 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 CDK5R2Q13319 367 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 RNF113BQ8IZP6 322 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 FRMD1Q8N878 549 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 TMEM185AQ8NFB2 350 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 APH1AQ96BI3 265 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ZPBPQ9BS86 351 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 SUCNR1Q9BXA5 334 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 SLA2Q9H6Q3 261 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 DCAF13Q9NV06 445 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 COL11A2P13942 1736 aaPredicted RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 SLC22A23A1A5C7 686 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 LRP5LA4QPB2 252 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 G3V2L1 256 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 HCRTR1O43613 425 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 CACNG3O60359 315 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ALOX12BO75342 701 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 FGF4P08620 206 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 RAB40ALP0C0E4 278 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ACP2P11117 423 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 SUB1P53999 127 aaKnown RBP eCLIP8.06□□□□□ -1.12
HPS4-209ENST00000466781 ZNF789Q5FWF6 425 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 RPL22L1Q6P5R6 122 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 PGAP1Q75T13 922 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 WDR5BQ86VZ2 330 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ADGRG5Q8IZF4 528 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 TERB2Q8NHR7 220 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 MITD1Q8WV92 249 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 RAB40AQ8WXH6 277 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 RAB3CQ96E17 227 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 SLC46A1Q96NT5 459 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 SELENOIQ9C0D9 397 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 OR51J1Q9H342 316 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 KCNIP2Q9NS61 270 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ADAMTS7Q9UKP4 1686 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 C20orf202A1L168 122 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 PRICKLE3O43900 615 aaPredicted RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 RPS17P08708 135 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 ITGAMP11215 1152 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 FOXA1P55317 472 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 PRDX1Q06830 199 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 GALEQ14376 348 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ZNF454Q8N9F8 522 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 CORO2AQ92828 525 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 LRFN5Q96NI6 719 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ACSS1Q9NUB1 689 aaPredicted RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 ANKRD10Q9NXR5 420 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 IL37Q9NZH6 218 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 H7C1C5 153 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 TNFRSF10AO00220 468 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 SNNO75324 88 aaPredicted RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 RFPL3O75679 317 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ADH4P08319 380 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 GM2AP17900 193 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 LCN6P62502 163 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 SRPXP78539 464 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 OR8G1Q15617 311 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 LINC01465Q8N7H1 131 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 GTF2H4Q92759 462 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 RTL8AQ9BWD3 113 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 MMP28Q9H239 520 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 PPA2Q9H2U2 334 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 RASD1Q9Y272 281 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ZCWPW2A0A1B0GU75 182 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 SHISA7A6NL88 538 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 FAM166BA8MTA8 275 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 ZNF749O43361 778 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 EIF2DP41214 584 aaKnown RBP8.06□□□□□ -1.12
HPS4-209ENST00000466781 GABREP78334 506 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 TLE4Q04727 773 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 KCNJ8Q15842 424 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 DTWD1Q8N5C7 304 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 LMNTD1Q8N9Z9 388 aa8.06□□□□□ -1.12
HPS4-209ENST00000466781 OR56B4Q8NH76 319 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms