RNA–Protein interactions for RNA: ENST00000466175.5

LETM1-202, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-202ENST00000466175 MAP2K6P52564 334 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 MFSD13AQ14CX5 517 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 TOMM34Q15785 309 aaPredicted RBP16.58■□□□□ 0.24
LETM1-202ENST00000466175 HSPB2Q16082 182 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 ZMAT1Q5H9K5 638 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 PAPD4Q6PIY7 484 aaKnown RBP16.58■□□□□ 0.24
LETM1-202ENST00000466175 TMEM205Q6UW68 189 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 FAM220AQ7Z4H9 259 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 LSRQ86X29 649 aaPredicted RBP16.58■□□□□ 0.24
LETM1-202ENST00000466175 LRRC28Q86X40 367 aaPredicted RBP16.58■□□□□ 0.24
LETM1-202ENST00000466175 RPS4Y2Q8TD47 263 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 DUSP19Q8WTR2 217 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 ZNF524Q96C55 264 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 TSPAN32Q96QS1 320 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 GFM1Q96RP9 751 aaKnown RBP16.58■□□□□ 0.24
LETM1-202ENST00000466175 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.58■□□□□ 0.24
LETM1-202ENST00000466175 PPP1R3EQ9H7J1 279 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 INIPQ9NRY2 104 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 NPAP1Q9NZP6 1156 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 TMEM14AQ9Y6G1 99 aa16.58■□□□□ 0.24
LETM1-202ENST00000466175 A0A1W2PQ09 198 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 SMIM30A4D0T7 59 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 TIAF1O95411 115 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 HLA-DQB1P01920 261 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 F13BP05160 661 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 CSF3P09919 207 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 EDNRAP25101 427 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 MSX1P28360 303 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 HCCSP53701 268 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 DAB2P98082 770 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 IDNKQ5T6J7 187 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 C1orf140Q5VVS0 124 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 ADGRG3Q86Y34 549 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 ZPLD1Q8TCW7 415 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 RNF138Q8WVD3 245 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 WDR54Q9H977 334 aa16.57■□□□□ 0.24
LETM1-202ENST00000466175 ARPC4-TTLL3A0A0A6YYG9 625 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 IGHV3-20A0A0C4DH32 117 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 TMEM72A0PK05 275 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 ZNF879B4DU55 563 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 XKRYO14609 159 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 ZFAND5O76080 213 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 DXOO77932 396 aaKnown RBP16.56■□□□□ 0.24
LETM1-202ENST00000466175 AHSA1O95433 338 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 IGHMP01871 453 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 UCHL1P09936 223 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 SPNP16150 400 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 AZGP1P25311 298 aaKnown RBP16.56■□□□□ 0.24
LETM1-202ENST00000466175 TALDO1P37837 337 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 APOBEC1P41238 236 aaKnown RBP16.56■□□□□ 0.24
LETM1-202ENST00000466175 COL28A1Q2UY09 1125 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 MESTQ5EB52 335 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 ZNF684Q5T5D7 378 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 EEF1A1P5Q5VTE0 462 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 SFXN4Q6P4A7 337 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 UNQ9370/PRO34162Q6UXP9 181 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 RPTNQ6XPR3 784 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 SMAP2Q8WU79 429 aaPredicted RBP16.56■□□□□ 0.24
LETM1-202ENST00000466175 ZNRF4Q8WWF5 429 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 HGDQ93099 445 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 PTDSS2Q9BVG9 487 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 MARCH7Q9H992 704 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 SDHAF3Q9NRP4 125 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 TAS2R5Q9NYW4 299 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 ZNF346Q9UL40 294 aaKnown RBP16.56■□□□□ 0.24
LETM1-202ENST00000466175 COPS3Q9UNS2 423 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 SEC16AO15027 2179 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 TRBV11-1A0A0K0K1C0 115 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 A0A1W2PRG6 482 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 SERPINI2O75830 405 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 OR6A2O95222 327 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 RAB3BP20337 219 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 PHF19Q5T6S3 580 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 TRIQKQ629K1 86 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 CDC20BQ86Y33 519 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 TIGD4Q8IY51 512 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 RFLNBQ8N5W9 214 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 KLHL15Q96M94 604 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 KLHDC3Q9BQ90 382 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 WDR77Q9BQA1 342 aaPredicted RBP16.56■□□□□ 0.24
LETM1-202ENST00000466175 CRB3Q9BUF7 120 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 ZCCHC4Q9H5U6 513 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 MRPL39Q9NYK5 338 aaKnown RBP16.56■□□□□ 0.24
LETM1-202ENST00000466175 FKBP7Q9Y680 259 aa16.56■□□□□ 0.24
LETM1-202ENST00000466175 PCNX2A6NKB5 2137 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 FAM25AB3EWG3 89 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 FAM25CB3EWG5 89 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 FAM25GB3EWG6 89 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 ADAM10O14672 748 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 SLC2A2P11168 524 aaPredicted RBP16.55■□□□□ 0.24
LETM1-202ENST00000466175 PRKCAP17252 672 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 RPL27P61353 136 aaKnown RBP16.55■□□□□ 0.24
LETM1-202ENST00000466175 EGR3Q06889 387 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 DBPQ10586 325 aaPredicted RBP16.55■□□□□ 0.24
LETM1-202ENST00000466175 IL18Q14116 193 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 YIF1BQ5BJH7 314 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 MRPL14Q6P1L8 145 aaKnown RBP16.55■□□□□ 0.24
LETM1-202ENST00000466175 Q8N402 240 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 C19orf18Q8NEA5 215 aa16.55■□□□□ 0.24
LETM1-202ENST00000466175 SLC22A8Q8TCC7 542 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms