RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 ARMC10Q8N2F6 343 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 OR6K6Q8NGW6 343 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 TSNAXQ99598 290 aaKnown RBP18.02■□□□□ 0.48
SDF4-205ENST00000465727 SYNPO2LQ9H987 977 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 IL21RQ9HBE5 538 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 FBXO34Q9NWN3 711 aa18.02■□□□□ 0.48
SDF4-205ENST00000465727 OR6C74A6NCV1 312 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 IDSB3KWA1 339 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 ZNF888P0CJ79 500 aaPredicted RBP18.02■□□□□ 0.47
SDF4-205ENST00000465727 PPM1AP35813 382 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 MAGEB1P43366 347 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 RAB13P51153 203 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 AKR1D1P51857 326 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 ACTBP60709 375 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 ACTG1P63261 375 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 PAN3Q58A45 887 aaKnown RBP18.02■□□□□ 0.47
SDF4-205ENST00000465727 FAM74A1Q5RGS3 127 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 LINC00114Q6XXX2 140 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 MAMSTRQ6ZN01 415 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 PGAP1Q75T13 922 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 TMEM185AQ8NFB2 350 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 SERINC2Q96SA4 455 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 SLC25A21Q9BQT8 299 aaPredicted RBP18.02■□□□□ 0.47
SDF4-205ENST00000465727 TIMM29Q9BSF4 260 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 TEX101Q9BY14 249 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 POTEKPQ9BYX7 375 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 GAREM1Q9H706 876 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 CDV3Q9UKY7 258 aaKnown RBP18.02■□□□□ 0.47
SDF4-205ENST00000465727 TNFSF18Q9UNG2 199 aa18.02■□□□□ 0.47
SDF4-205ENST00000465727 CTAG2O75638 210 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 ADH1AP07327 375 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 OR4E1P0C645 316 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 RPS15AP62244 130 aaKnown RBP18.01■□□□□ 0.47
SDF4-205ENST00000465727 MICBQ29980 383 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 STEAP1BQ6NZ63 245 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 CLEC1AQ8NC01 280 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 NT5CQ8TCD5 201 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 DUSP19Q8WTR2 217 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 ZNRF4Q8WWF5 429 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 CCDC74AQ96AQ1 378 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 NMNAT3Q96T66 252 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 CFHR5Q9BXR6 569 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 HDAC8Q9BY41 377 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 MKKSQ9NPJ1 570 aaPredicted RBP18.01■□□□□ 0.47
SDF4-205ENST00000465727 BIN3Q9NQY0 253 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 RXFP3Q9NSD7 469 aa18.01■□□□□ 0.47
SDF4-205ENST00000465727 F8W036 122 aa18■□□□□ 0.47
SDF4-205ENST00000465727 IFI6P09912 130 aa18■□□□□ 0.47
SDF4-205ENST00000465727 ADH5P11766 374 aa18■□□□□ 0.47
SDF4-205ENST00000465727 PEBP1P30086 187 aaKnown RBP18■□□□□ 0.47
SDF4-205ENST00000465727 PRSS3P35030 304 aa18■□□□□ 0.47
SDF4-205ENST00000465727 RPL4P36578 427 aaKnown RBP18■□□□□ 0.47
SDF4-205ENST00000465727 P2RY2P41231 377 aa18■□□□□ 0.47
SDF4-205ENST00000465727 RPL35P42766 123 aaKnown RBP18■□□□□ 0.47
SDF4-205ENST00000465727 FNTBP49356 437 aa18■□□□□ 0.47
SDF4-205ENST00000465727 PPIAP62937 165 aaKnown RBP18■□□□□ 0.47
SDF4-205ENST00000465727 HAGHLQ6PII5 290 aaPredicted RBP18■□□□□ 0.47
SDF4-205ENST00000465727 OR5M8Q8NGP6 311 aa18■□□□□ 0.47
SDF4-205ENST00000465727 THRSPQ92748 146 aa18■□□□□ 0.47
SDF4-205ENST00000465727 POFUT1Q9H488 388 aa18■□□□□ 0.47
SDF4-205ENST00000465727 SLC17A5Q9NRA2 495 aa18■□□□□ 0.47
SDF4-205ENST00000465727 COA4Q9NYJ1 87 aa18■□□□□ 0.47
SDF4-205ENST00000465727 CPNE7Q9UBL6 633 aa18■□□□□ 0.47
SDF4-205ENST00000465727 MOKQ9UQ07 419 aa18■□□□□ 0.47
SDF4-205ENST00000465727 YBX2Q9Y2T7 364 aaKnown RBP18■□□□□ 0.47
SDF4-205ENST00000465727 A0A1B0GTI1 187 aa18■□□□□ 0.47
SDF4-205ENST00000465727 TMEM218A2RU14 115 aa18■□□□□ 0.47
SDF4-205ENST00000465727 OR14I1A6ND48 311 aa18■□□□□ 0.47
SDF4-205ENST00000465727 OR6C68A6NDL8 312 aa18■□□□□ 0.47
SDF4-205ENST00000465727 OR5H14A6NHG9 310 aa18■□□□□ 0.47
SDF4-205ENST00000465727 APOC1P02654 83 aa18■□□□□ 0.47
SDF4-205ENST00000465727 MAP3K8P41279 467 aa18■□□□□ 0.47
SDF4-205ENST00000465727 LUMP51884 338 aaPredicted RBP18■□□□□ 0.47
SDF4-205ENST00000465727 SNTB1Q13884 538 aaKnown RBP18■□□□□ 0.47
SDF4-205ENST00000465727 TOMM20Q15388 145 aa18■□□□□ 0.47
SDF4-205ENST00000465727 ULK3Q6PHR2 472 aa18■□□□□ 0.47
SDF4-205ENST00000465727 FIGNL1Q6PIW4 674 aa18■□□□□ 0.47
SDF4-205ENST00000465727 OR2W3Q7Z3T1 314 aa18■□□□□ 0.47
SDF4-205ENST00000465727 VN1R4Q7Z5H5 301 aa18■□□□□ 0.47
SDF4-205ENST00000465727 LURAP1LQ8IV03 231 aa18■□□□□ 0.47
SDF4-205ENST00000465727 ZNF595Q8IYB9 648 aa18■□□□□ 0.47
SDF4-205ENST00000465727 TMEM185BQ9H7F4 350 aa18■□□□□ 0.47
SDF4-205ENST00000465727 COMMD9Q9P000 198 aa18■□□□□ 0.47
SDF4-205ENST00000465727 EPHA6Q9UF33 1036 aa18■□□□□ 0.47
SDF4-205ENST00000465727 ADAM18Q9Y3Q7 739 aa18■□□□□ 0.47
SDF4-205ENST00000465727 PLEKHM1Q9Y4G2 1056 aa18■□□□□ 0.47
SDF4-205ENST00000465727 TRBV5-7A0A0A0MS05 114 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 ARPC4-TTLL3A0A0A6YYG9 625 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 TMEM82A0PJX8 343 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 C1QTNF3-AMACRE9PGA6 284 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 SIGLEC5O15389 551 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 SRPX2O60687 465 aaPredicted RBP17.99■□□□□ 0.47
SDF4-205ENST00000465727 LDB3O75112 727 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 UPK3AO75631 287 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 SLC35G6P0C7Q6 338 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 GPR143P51810 404 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 SIGLEC14Q08ET2 396 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 C11orf87Q6NUJ2 197 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 SLC16A9Q7RTY1 509 aa17.99■□□□□ 0.47
SDF4-205ENST00000465727 OR4N5Q8IXE1 308 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms