RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ATP23Q9Y6H3 246 aa18.99■□□□□ 0.63
LIME1-203ENST00000465591 ABCA1O95477 2261 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 ARPC4-TTLL3A0A0A6YYG9 625 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 TRAPPC13A5PLN9 417 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 ZNF503-AS2A6NEH8 195 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 SHOX2O60902 331 aaPredicted RBP18.98■□□□□ 0.63
LIME1-203ENST00000465591 SEC14L2O76054 403 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 HEXAP06865 529 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 PUDPQ08623 228 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 C1QTNF12Q5T7M4 302 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 AGAP6Q5VW22 663 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 ANKRD16Q6P6B7 361 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 CARM1Q86X55 608 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 MUC15Q8N387 334 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 GPR137CQ8N3F9 429 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 MAGEE2Q8TD90 523 aaPredicted RBP18.98■□□□□ 0.63
LIME1-203ENST00000465591 ZNF426Q9BUY5 554 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 CACNG6Q9BXT2 260 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 CRLF2Q9HC73 371 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 CBLN4Q9NTU7 201 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 SH3GLB1Q9Y371 365 aa18.98■□□□□ 0.63
LIME1-203ENST00000465591 SLC35F4A4IF30 521 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 M0R3G1 203 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 KPNA4O00629 521 aaPredicted RBP18.97■□□□□ 0.63
LIME1-203ENST00000465591 SERPINI2O75830 405 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 CH25HO95992 272 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 FABP6P51161 128 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 SH3BGRP55822 239 aaPredicted RBP18.97■□□□□ 0.63
LIME1-203ENST00000465591 UBE2NP61088 152 aaKnown RBP18.97■□□□□ 0.63
LIME1-203ENST00000465591 VEZF1Q14119 521 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 ZNF74Q16587 644 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 DNM1P46Q6ZS02 220 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 MYPOPQ86VE0 399 aaPredicted RBP18.97■□□□□ 0.63
LIME1-203ENST00000465591 C20orf196Q8IYI0 205 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 DEPDC4Q8N2C3 294 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 LRRC17Q8N6Y2 441 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 PIK3C3Q8NEB9 887 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 ANKK1Q8NFD2 765 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 OR5J2Q8NH18 312 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 HTRA1Q92743 480 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 SLC38A2Q96QD8 506 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 CMTM6Q9NX76 183 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 CRNNQ9UBG3 495 aaPredicted RBP18.97■□□□□ 0.63
LIME1-203ENST00000465591 HIVEP2P31629 2446 aa18.97■□□□□ 0.63
LIME1-203ENST00000465591 FAM220BPB1ANY3 271 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 C11orf98E9PRG8 122 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 MT-ATP6P00846 226 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 CELA3BP08861 270 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 ERICH5Q6P6B1 374 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 TTC33Q6PID6 262 aaPredicted RBP18.96■□□□□ 0.63
LIME1-203ENST00000465591 FBXL14Q8N1E6 418 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 PCYOX1LQ8NBM8 494 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 MAPK1IP1LQ8NDC0 245 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 RASSF5Q8WWW0 418 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 PROX1Q92786 737 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 FKRPQ9H9S5 495 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 MEPEQ9NQ76 525 aaPredicted RBP18.96■□□□□ 0.63
LIME1-203ENST00000465591 GID8Q9NWU2 228 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 TAS2R5Q9NYW4 299 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 NOX1Q9Y5S8 564 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 SONP18583 2426 aaKnown RBP18.96■□□□□ 0.63
LIME1-203ENST00000465591 ABCA2Q9BZC7 2435 aa18.96■□□□□ 0.63
LIME1-203ENST00000465591 RNF223E7ERA6 249 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 SLC22A2O15244 555 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 AKAP8O43823 692 aaKnown RBP18.95■□□□□ 0.62
LIME1-203ENST00000465591 IGLV1-44P01699 117 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 CECR9P0C854 216 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 ADORA3P0DMS8 318 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 AHCYP23526 432 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 OR1E2P47887 323 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 CAMK2DQ13557 499 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 ZNF544Q6NX49 715 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 SLC46A3Q7Z3Q1 461 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 PXKQ7Z7A4 578 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 TREML1Q86YW5 311 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 NKAIN4Q8IVV8 208 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 MPP4Q96JB8 637 aa18.95■□□□□ 0.62
LIME1-203ENST00000465591 CALCRP30988 508 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 NAAAQ02083 359 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 KRTAP1-1Q07627 177 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 ETFDHQ16134 617 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 MST1LQ2TV78 715 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 LRRC23Q53EV4 343 aaPredicted RBP18.94■□□□□ 0.62
LIME1-203ENST00000465591 CYBRD1Q53TN4 286 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 DEF8Q6ZN54 512 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 OR2T12Q8NG77 320 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 HS6ST2Q96MM7 605 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 BAG5Q9UL15 447 aa18.94■□□□□ 0.62
LIME1-203ENST00000465591 ANK3Q12955 4377 aaKnown RBP18.93■□□□□ 0.62
LIME1-203ENST00000465591 FAM171A2A8MVW0 826 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 ZNF99A8MXY4 864 aaPredicted RBP18.93■□□□□ 0.62
LIME1-203ENST00000465591 IGKV3-15P01624 115 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 COX4I1P13073 169 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 HOXB1P14653 301 aaPredicted RBP18.93■□□□□ 0.62
LIME1-203ENST00000465591 IFNGR1P15260 489 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 FUT4P22083 530 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 APOBEC3AP31941 199 aaPredicted RBP18.93■□□□□ 0.62
LIME1-203ENST00000465591 KDELR2P33947 212 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 UGT2B15P54855 530 aa18.93■□□□□ 0.62
LIME1-203ENST00000465591 BIDP55957 195 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms