RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 PRKCAP17252 672 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 SDHAP31040 664 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 OTX2P32243 289 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 PTGDSP41222 190 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 CDKN2AP42771 156 aaKnown RBP13.09□□□□□ -0.31
HDAC6-213ENST00000462730 ACTC1P68032 377 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 ACTA1P68133 377 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF85Q03923 595 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 PON3Q15166 354 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 NTRK2Q16620 822 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 CRTC2Q53ET0 693 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-213ENST00000462730 C22orf42Q6IC83 251 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 ARSKQ6UWY0 536 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 NDUFAF7Q7L592 441 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 PPP1R32Q7Z5V6 425 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 ESX1Q8N693 406 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 LILRB4Q8NHJ6 448 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 STK35Q8TDR2 534 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 ZNRF4Q8WWF5 429 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TSPAN32Q96QS1 320 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TIMP4Q99727 224 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 NPAS1Q99742 590 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 OR11A1Q9GZK7 315 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TP63Q9H3D4 680 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-213ENST00000462730 SMURF1Q9HCE7 757 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TBC1D24Q9ULP9 559 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 FARSAQ9Y285 508 aaKnown RBP13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TRAPPC4Q9Y296 219 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 MUC6Q6W4X9 2439 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TXNDC12O95881 172 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 CELP19835 753 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TNFSF8P32971 234 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 NAA10P41227 235 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-213ENST00000462730 DIO1P49895 249 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 OR2B6P58173 313 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 GGTLC2Q14390 218 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 SLC35D3Q5M8T2 416 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 FAM69AQ5T7M9 428 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF544Q6NX49 715 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 POMGNT2Q8NAT1 580 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 NLGN4YQ8NFZ3 816 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-213ENST00000462730 OR6F1Q8NGZ6 308 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 SETD6Q8TBK2 473 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 M1APQ8TC57 530 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 TMED9Q9BVK6 235 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 BABAM2Q9NXR7 383 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 GRHPRQ9UBQ7 328 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 ZNF221Q9UK13 617 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 VDAC3Q9Y277 283 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 WIF1Q9Y5W5 379 aa13.09□□□□□ -0.31
HDAC6-213ENST00000462730 A0A1W2PQL4 384 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-213ENST00000462730 C11orf98E9PRG8 122 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 MASP2O00187 686 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 ITGA10O75578 1167 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 TFP02787 698 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 MT-ND5P03915 603 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 GRPRP30550 384 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 RPS19P39019 145 aaKnown RBP13.08□□□□□ -0.32
HDAC6-213ENST00000462730 RPS15P62841 145 aaKnown RBP13.08□□□□□ -0.32
HDAC6-213ENST00000462730 FABP5Q01469 135 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 BDH1Q02338 343 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 FOXF1Q12946 379 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 SLC35F2Q8IXU6 374 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 OR8H2Q8N162 312 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 OR6K6Q8NGW6 343 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 OR5J2Q8NH18 312 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 RPRD1BQ9NQG5 326 aaKnown RBP13.08□□□□□ -0.32
HDAC6-213ENST00000462730 SDHAF3Q9NRP4 125 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 SNTG1Q9NSN8 517 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 TAS2R5Q9NYW4 299 aa13.08□□□□□ -0.32
HDAC6-213ENST00000462730 PCSK5Q92824 1860 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 J3QLW9 94 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 CDRT1O95170 752 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 ZNF19P17023 458 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 F8A1P23610 371 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 MSX1P28360 303 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 PYCR1P32322 319 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 DLSTP36957 453 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 SLC25A1P53007 311 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 HCCSP53701 268 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 IL10RAQ13651 578 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 SSPNQ14714 243 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 SGCBQ16585 318 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 MESTQ5EB52 335 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 EMC4Q5J8M3 183 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 C6orf183Q5T699 404 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 GPR139Q6DWJ6 353 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 C5orf46Q6UWT4 87 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 SSX6Q7RTT6 188 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 NRARPQ7Z6K4 114 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 MARCH9Q86YJ5 346 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 UBQLNLQ8IYU4 475 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 RFLNBQ8N5W9 214 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 C4orf36Q96KX1 117 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 TTTY10Q9BZA0 68 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 IRF2BPLQ9H1B7 796 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 TRIM36Q9NQ86 728 aa13.07□□□□□ -0.32
HDAC6-213ENST00000462730 DMXL1Q9Y485 3027 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms