RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SUPT7LO94864 414 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 GAPDHP04406 335 aaKnown RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 CCNCP24863 283 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 FMO3P31513 532 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 SLC26A3P40879 764 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 VDAC2P45880 294 aaPredicted RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 ACLYP53396 1101 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 SUB1P53999 127 aaKnown RBP eCLIP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 RCN1Q15293 331 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 IL17AQ16552 155 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 NRF1Q16656 503 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 RNF212Q495C1 297 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 COA6Q5JTJ3 125 aaKnown RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 GPR157Q5UAW9 335 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF544Q6NX49 715 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 UQCC3Q6UW78 93 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 C6orf89Q6UWU4 347 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 MFSD6LQ8IWD5 586 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 TTC5Q8N0Z6 440 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF557Q8N988 423 aaPredicted RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 OR1L6Q8NGR2 347 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 OR6X1Q8NH79 312 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 FAM210BQ96KR6 192 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 FCRL1Q96LA6 429 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 NAP1L5Q96NT1 182 aaPredicted RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 CHP1Q99653 195 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 SH3GL3Q99963 347 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 CENPKQ9BS16 269 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 FAM192AQ9GZU8 254 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 SRMSQ9H3Y6 488 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 EXO5Q9H790 373 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 NANOGQ9H9S0 305 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 ADAP2Q9NPF8 381 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 PISDQ9UG56 409 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 MTRF1LQ9UGC7 380 aaKnown RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 SLC7A8Q9UHI5 535 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 MMP17Q9ULZ9 603 aa2.13□□□□□ -2.07
HDAC6-212ENST00000461608 PHF3Q92576 2039 aaKnown RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 RAI1Q7Z5J4 1906 aaPredicted RBP2.13□□□□□ -2.07
HDAC6-212ENST00000461608 FAM231BA6NCW3 169 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 H3BNH8 94 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 CDC7O00311 574 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 GOSR2O14653 212 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 NPIPB7O75200 414 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 C1orf105O95561 183 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 KLF8O95600 359 aaPredicted RBP2.12□□□□□ -2.07
HDAC6-212ENST00000461608 IGHV2-5P01817 119 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 KRTAP1-4P0C5Y4 121 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF853P0CG23 659 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 ZNF43P17038 809 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 EIF2S2P20042 333 aaKnown RBP2.12□□□□□ -2.07
HDAC6-212ENST00000461608 FUT3P21217 361 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 SLC2A5P22732 501 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 RORAP35398 523 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 ATP5C1P36542 298 aaKnown RBP2.12□□□□□ -2.07
HDAC6-212ENST00000461608 GPR6P46095 362 aaPredicted RBP2.12□□□□□ -2.07
HDAC6-212ENST00000461608 NPBWR2P48146 333 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 CSNK1DP48730 415 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 SSR4P51571 173 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 CCNA1P78396 465 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 BEX3Q00994 111 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 TGFBR3Q03167 851 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 ACVR1Q04771 509 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 PPIL2Q13356 520 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 HSP90AB3PQ58FF7 597 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 PRAMEF20Q5VT98 475 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 CERS6Q6ZMG9 384 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 TGIF2LYQ8IUE0 185 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 PIANPQ8IYJ0 282 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 PDIK1LQ8N165 341 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 PNKDQ8N490 385 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 FAM71E2Q8N5Q1 922 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 SDR9C7Q8NEX9 313 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 B3GNT7Q8NFL0 401 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 OR2G2Q8NGZ5 317 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 RHEBL1Q8TAI7 183 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 FANK1Q8TC84 345 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 BLOC1S5Q8TDH9 187 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 TSEN15Q8WW01 171 aaKnown RBP2.12□□□□□ -2.07
HDAC6-212ENST00000461608 ELMO1Q92556 727 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 TGS1Q96RS0 853 aaKnown RBP2.12□□□□□ -2.07
HDAC6-212ENST00000461608 MBOAT4Q96T53 435 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 OSBPL10Q9BXB5 764 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 GPR61Q9BZJ8 451 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 PDFQ9HBH1 243 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 NEK6Q9HC98 313 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 ANAPC11Q9NYG5 84 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 CALYQ9NYX4 217 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 XCL2Q9UBD3 114 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 NOTCH2Q04721 2471 aa2.12□□□□□ -2.07
HDAC6-212ENST00000461608 TRAV39A0A0B4J263 110 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RBMY1BA6NDE4 496 aaKnown RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RBMY1EA6NEQ0 496 aaKnown RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 KRTAP4-16G5E9R7 235 aaPredicted RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 H0Y9J4 135 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RNF13O43567 381 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 EEDO75530 441 aaKnown RBP2.11□□□□□ -2.07
HDAC6-212ENST00000461608 FTH1P02794 183 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 IGHV4-34P06331 123 aa2.11□□□□□ -2.07
HDAC6-212ENST00000461608 RBMY1DP0C7P1 496 aaKnown RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms