RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 TNNT2P45379 298 aaPredicted RBP2.28□□□□□ -2.04
VCL-203ENST00000461383 RFX3P48380 749 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 DLX1P56177 255 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 RIPPLY3P57055 190 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 C21orf59P57076 290 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 FBXW4P57775 412 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 MRPS22P82650 360 aaKnown RBP2.28□□□□□ -2.04
VCL-203ENST00000461383 ACVR1Q04771 509 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 ARHGAP19Q14CB8 494 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 HERPUD1Q15011 391 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 NRF1Q16656 503 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 LRRC66Q68CR7 880 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 SLC8B1Q6J4K2 584 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 CNIH2Q6PI25 160 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 ZNF620Q6ZNG0 422 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 EIF3MQ7L2H7 374 aaKnown RBP2.28□□□□□ -2.04
VCL-203ENST00000461383 LUZP2Q86TE4 346 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 PNKDQ8N490 385 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 EID2Q8N6I1 236 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 NKAPP1Q8N9T2 125 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 PLPPR1Q8TBJ4 325 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 GPR151Q8TDV0 419 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 ACOT11Q8WXI4 607 aaPredicted RBP2.28□□□□□ -2.04
VCL-203ENST00000461383 ARPC1AQ92747 370 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 SLC38A4Q969I6 547 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 RPUSD4Q96CM3 377 aaKnown RBP2.28□□□□□ -2.04
VCL-203ENST00000461383 CCDC126Q96EE4 140 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 ZNF578Q96N58 590 aaPredicted RBP2.28□□□□□ -2.04
VCL-203ENST00000461383 MBOAT4Q96T53 435 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 C20orf24Q9BUV8 137 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 C20orf85Q9H1P6 137 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 ZNF160Q9HCG1 818 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 INPP5EQ9NRR6 644 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 EXD2Q9NVH0 621 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 CALYQ9NYX4 217 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 IL17CQ9P0M4 197 aa2.28□□□□□ -2.04
VCL-203ENST00000461383 MTRF1LQ9UGC7 380 aaKnown RBP2.28□□□□□ -2.04
VCL-203ENST00000461383 ZNFX1Q9P2E3 1918 aaKnown RBP2.28□□□□□ -2.04
VCL-203ENST00000461383 COL2A1P02458 1487 aaPredicted RBP2.27□□□□□ -2.05
VCL-203ENST00000461383 PLEKHG1Q9ULL1 1385 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 NINLQ9Y2I6 1382 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 CDHR2Q9BYE9 1310 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 LRRIQ3A6PVS8 624 aaPredicted RBP2.27□□□□□ -2.05
VCL-203ENST00000461383 KRTAP9-6A8MVA2 160 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 WRBO00258 174 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 DLGAP1O14490 977 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 CLOCKO15516 846 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 H6PDO95479 791 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 FGGP02679 453 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 ALDOBP05062 364 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 HPNP05981 417 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 ANXA5P08758 320 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 CALM1P0DP23 149 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 CALM2P0DP24 149 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 CALM3P0DP25 149 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 SLC26A3P40879 764 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 ATP5OP48047 213 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 UGT2B15P54855 530 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 YWHAGP61981 247 aaKnown RBP eCLIP2.27□□□□□ -2.05
VCL-203ENST00000461383 ECH1Q13011 328 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 C1orf94Q6P1W5 598 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 PRSS41Q7RTY9 318 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 SPAG16Q8N0X2 631 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 PUSL1Q8N0Z8 303 aaKnown RBP2.27□□□□□ -2.05
VCL-203ENST00000461383 LIX1Q8N485 282 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 CCDC148Q8NFR7 591 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 OR7G2Q8NG99 324 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 LINC01006Q8NI28 216 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 RHEBL1Q8TAI7 183 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 NEIL3Q8TAT5 605 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 SLC22A8Q8TCC7 542 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 CXorf40AQ8TE69 158 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 SDR42E1Q8WUS8 393 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 PIBF1Q8WXW3 757 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 ELMO1Q92556 727 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 PHYHIPLQ96FC7 376 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 MED8Q96G25 268 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 TMEM101Q96IK0 257 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 IMMP1LQ96LU5 166 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 SH3GL1Q99961 368 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 RARRES2Q99969 163 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 RASL11BQ9BPW5 248 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 RIOK2Q9BVS4 552 aaKnown RBP2.27□□□□□ -2.05
VCL-203ENST00000461383 TMEM185BQ9H7F4 350 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 NANOGQ9H9S0 305 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 LY9Q9HBG7 655 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 CAB39Q9Y376 341 aaPredicted RBP2.27□□□□□ -2.05
VCL-203ENST00000461383 MMP24Q9Y5R2 645 aa2.27□□□□□ -2.05
VCL-203ENST00000461383 USP47Q96K76 1375 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 IGLV3-22A0A075B6J6 115 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 FAM231BA6NCW3 169 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 LRRIQ4A6NIV6 560 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 OR2AG2A6NM03 316 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 GJE1A6NN92 205 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 C12orf77C9JDV5 145 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 CASQ2O14958 399 aaPredicted RBP2.26□□□□□ -2.05
VCL-203ENST00000461383 RAB29O14966 203 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 DNAJB6O75190 326 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 TNFSF13O75888 250 aa2.26□□□□□ -2.05
VCL-203ENST00000461383 IGHV2-5P01817 119 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms