RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 REEP6Q96HR9 211 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 PIGQQ9BRB3 760 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 NDFIP1Q9BT67 221 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 BARHL1Q9BZE3 327 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 NXT1Q9UKK6 140 aaKnown RBP8.35□□□□□ -1.07
BRCA1-205ENST00000461221 KLK4Q9Y5K2 254 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 GPR45Q9Y5Y3 372 aa8.35□□□□□ -1.07
BRCA1-205ENST00000461221 CNIH1O95406 144 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 ABHD16AO95870 558 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 CSF2RAP15509 400 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 HOXD13P35453 343 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 PGGT1BP53609 377 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 WNT7BP56706 349 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 HTR4Q13639 388 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 C9orf135Q5VTT2 229 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SFXN4Q6P4A7 337 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 LSMEM2Q8N112 164 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SLC25A21Q9BQT8 299 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-205ENST00000461221 TXNRD2Q9NNW7 524 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 GDE1Q9NZC3 331 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SLC31A2O15432 143 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 F13BP05160 661 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 ITGB8P26012 769 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 FCER1GP30273 86 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 KIAA0141Q14154 515 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-205ENST00000461221 CRMP1Q14194 572 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 TBC1D28Q2M2D7 210 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 C19orf35Q6ZS72 473 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SHISA6Q6ZSJ9 500 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 MBOAT2Q6ZWT7 520 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 RTL10Q7L3V2 364 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 CPXM2Q8N436 756 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 OR51A4Q8NGJ6 313 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SCARB1Q8WTV0 552 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 LIPHQ8WWY8 451 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 BADQ92934 168 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 RBPMSQ93062 196 aaKnown RBP8.34□□□□□ -1.07
BRCA1-205ENST00000461221 BORCS6Q96GS4 357 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SEC22AQ96IW7 307 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 TGIF2Q9GZN2 237 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 LOC100289279A0A1B0GTE1 492 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 PPP5D1E7EU14 171 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 PAPLNO95428 1278 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SCG5P05408 212 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 DHRS4L1P0CG22 281 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 FOXA1P55317 472 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 TAS2R45P59539 299 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 TNFRSF17Q02223 184 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 HNRNPA1L2Q32P51 320 aaKnown RBP8.34□□□□□ -1.07
BRCA1-205ENST00000461221 NXNL2Q5VZ03 156 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SYT13Q7L8C5 426 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 H2BFWTQ7Z2G1 175 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 NAXDQ8IW45 347 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 KCNRGQ8N5I3 272 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 TMEM217Q8N7C4 229 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 CPEB3Q8NE35 698 aaKnown RBP8.34□□□□□ -1.07
BRCA1-205ENST00000461221 OR5B3Q8NH48 314 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 FAM173AQ9BQD7 235 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 VPS25Q9BRG1 176 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 ZNF251Q9BRH9 671 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 HSPB6O14558 160 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 OPN1LWP04000 364 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 CD68P34810 354 aaPredicted RBP8.34□□□□□ -1.07
BRCA1-205ENST00000461221 EIF1P41567 113 aaKnown RBP8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SLC1A3P43003 542 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 DCAF12Q5T6F0 453 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 HSD11B1LQ7Z5J1 315 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 TCEAL8Q8IYN2 117 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 PRSS35Q8N3Z0 413 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 BPIFCQ8NFQ6 507 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 OR51A2Q8NGJ7 313 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 OR6M1Q8NGM8 313 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 HSD17B8Q92506 261 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 C16orf70Q9BSU1 422 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 TUBB1Q9H4B7 451 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 CORINQ9Y5Q5 1042 aa8.34□□□□□ -1.07
BRCA1-205ENST00000461221 SERINC4A6NH21 518 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 ACOD1A6NK06 481 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 C1orf105O95561 183 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 MAOBP27338 520 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 PRLHRP49683 370 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 EDDM3BP56851 147 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 RPS25P62851 125 aaKnown RBP8.34□□□□□ -1.08
BRCA1-205ENST00000461221 SLC35A2P78381 396 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 ZP2Q05996 745 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 GDPD3Q7L5L3 318 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 SCCPDHQ8NBX0 429 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 GPR26Q8NDV2 337 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 EGLN1Q9GZT9 426 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 WWTR1Q9GZV5 400 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 TMPRSS5Q9H3S3 457 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 PIGMQ9H3S5 423 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 MED9Q9NWA0 146 aa8.34□□□□□ -1.08
BRCA1-205ENST00000461221 CXXC1Q9P0U4 656 aaPredicted RBP8.34□□□□□ -1.08
BRCA1-205ENST00000461221 ZFP92A6NM28 416 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 LGALS8O00214 317 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 TAAR5O14804 337 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 CTXN2P0C2S0 81 aa8.33□□□□□ -1.08
BRCA1-205ENST00000461221 PTBP1P26599 531 aaKnown RBP eCLIP8.33□□□□□ -1.081e-7■■■■■ 45.2
BRCA1-205ENST00000461221 ZNF140P52738 457 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms