RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 LZTS2Q9BRK4 669 aa3.8□□□□□ -1.8
CCDC50-203ENST00000460064 SIAEQ9HAT2 523 aa3.8□□□□□ -1.8
CCDC50-203ENST00000460064 QPCTLQ9NXS2 382 aa3.8□□□□□ -1.8
CCDC50-203ENST00000460064 PISDQ9UG56 409 aa3.8□□□□□ -1.8
CCDC50-203ENST00000460064 NEUROG3Q9Y4Z2 214 aa3.8□□□□□ -1.8
CCDC50-203ENST00000460064 IGLV3-22A0A075B6J6 115 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 A0A0G2JLM5 398 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 HEATR9A2RTY3 570 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 UPK3AO75631 287 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 KLF8O95600 359 aaPredicted RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 TMEM50AO95807 157 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 CST1P01037 141 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 SERPIND1P05546 499 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 ICAM2P13598 275 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 TNNI1P19237 187 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 KITLGP21583 273 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 CHMLP26374 656 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 IFNA8P32881 189 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 NOVP48745 357 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 ETV1P50549 477 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 SUCLG1P53597 346 aaKnown RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 ENPEPQ07075 957 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 KRT71Q3SY84 523 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 CASC10Q5T4H9 136 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 RALGPS2Q86X27 583 aaPredicted RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 PIANPQ8IYJ0 282 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 PDCL2Q8N4E4 241 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 AGR3Q8TD06 166 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 ACOT11Q8WXI4 607 aaPredicted RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 SMARCD2Q92925 531 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 HSFY1Q96LI6 401 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 SORT1Q99523 831 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 RASL11BQ9BPW5 248 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 TMEM246Q9BRR3 403 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 RIOK2Q9BVS4 552 aaKnown RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 CCDC94Q9BW85 323 aaPredicted RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 HES7Q9BYE0 225 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 NANOGQ9H9S0 305 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 MRPL47Q9HD33 250 aaKnown RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 CELA1Q9UNI1 258 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 CHTOPQ9Y3Y2 248 aaKnown RBP3.79□□□□□ -1.8
CCDC50-203ENST00000460064 SLC25A15Q9Y619 301 aa3.79□□□□□ -1.8
CCDC50-203ENST00000460064 CROCCQ5TZA2 2017 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 WDR19Q8NEZ3 1342 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 KIR2DL5BA0A0G2JN68 375 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 KIR2DL5BA0A0G2JPC4 375 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 CTAGE15A4D2H0 777 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 GJE1A6NN92 205 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 A8MU10 97 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 C12orf77C9JDV5 145 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 TNFSF13O75888 250 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 FGF1P05230 155 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 NEFHP12036 1026 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 ELK1P19419 428 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 HNRNPH3P31942 346 aaKnown RBP3.78□□□□□ -1.8
CCDC50-203ENST00000460064 ATP5C1P36542 298 aaKnown RBP3.78□□□□□ -1.8
CCDC50-203ENST00000460064 VHLP40337 213 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 PLP1P60201 277 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 KCNJ2P63252 427 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 TMEM107Q6UX40 140 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 CTAGE6Q86UF2 777 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 KIR2DL5AQ8N109 375 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 SPERTQ8NA61 448 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 SUMF2Q8NBJ7 301 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 OR2G2Q8NGZ5 317 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 KIR2DL5BQ8NHK3 375 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 SUN5Q8TC36 379 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 FCRL1Q96LA6 429 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 OR8B4Q96RC9 309 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 TMEM59Q9BXS4 323 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 GPR61Q9BZJ8 451 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 OR11A1Q9GZK7 315 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 ADAP2Q9NPF8 381 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 CALYQ9NYX4 217 aa3.78□□□□□ -1.8
CCDC50-203ENST00000460064 PHF3Q92576 2039 aaKnown RBP3.78□□□□□ -1.8
CCDC50-203ENST00000460064 TTC41PQ6P2S7 1318 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 CDHR2Q9BYE9 1310 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 C12orf71A8MTZ7 269 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 POLR3GO15318 223 aaPredicted RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 RNF113AO15541 343 aaKnown RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 MGRN1O60291 552 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 FAM189A1O60320 539 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 NMT2O60551 498 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 NPIPB7O75200 414 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 ERLIN1O75477 346 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 WBP4O75554 376 aaKnown RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 C1orf105O95561 183 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 IGHV2-5P01817 119 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 DNAH10OSP0CZ25 163 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 TROVE2P10155 538 aaKnown RBP eCLIP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 HPGDP15428 266 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 CTRLP40313 264 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 YAP1P46937 504 aaKnown RBP3.77□□□□□ -1.81
CCDC50-203ENST00000460064 WNT4P56705 351 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 PSG7Q13046 419 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 CYTH1Q15438 398 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 TGFBIQ15582 683 aa3.77□□□□□ -1.81
CCDC50-203ENST00000460064 TRIM40Q6P9F5 258 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms