RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 RNF32Q9H0A6 362 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 DEFB127Q9H1M4 99 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 PTGES2Q9H7Z7 377 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ZFAND3Q9H8U3 227 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 KRCC1Q9NPI7 259 aaPredicted RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 ASB6Q9NWX5 421 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ALKBH4Q9NXW9 302 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 MRPL39Q9NYK5 338 aaKnown RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 KLHL13Q9P2N7 655 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 SCOCQ9UIL1 159 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 ING1Q9UK53 422 aaPredicted RBP7.81□□□□□ -1.16
RIF1-208ENST00000457745 KLHDC2Q9Y2U9 406 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 PCDHGB6Q9Y5F9 930 aa7.81□□□□□ -1.16
RIF1-208ENST00000457745 A0A087WV48 116 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 CLCA1A8K7I4 914 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 CXCL13O43927 109 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 SELENOFO60613 162 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 TRAPPC6AO75865 159 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 LALBAP00709 142 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 MT-ATP6P00846 226 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 IGHMP01871 453 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 SCG5P05408 212 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 LIMS3P0CW19 117 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 LIMS4P0CW20 117 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 IFNGR1P15260 489 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ZNF17P17021 662 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 JUNBP17275 347 aaPredicted RBP7.8□□□□□ -1.16
RIF1-208ENST00000457745 BMP7P18075 431 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 EEF1B2P24534 225 aaKnown RBP7.8□□□□□ -1.16
RIF1-208ENST00000457745 GSTT1P30711 240 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 TGFBR2P37173 567 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 CASRP41180 1078 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 RPS27P42677 84 aaKnown RBP7.8□□□□□ -1.16
RIF1-208ENST00000457745 ID4P47928 161 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 LHX2P50458 406 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 CDH11P55287 796 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 CLDN18P56856 261 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 HSF1Q00613 529 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ST3GAL4Q11206 333 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 RAB39AQ14964 217 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 TBR1Q16650 682 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ARHGAP11AQ6P4F7 1023 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 LEG1Q6P5S2 330 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 FGD2Q7Z6J4 655 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 PM20D2Q8IYS1 436 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 UBQLNLQ8IYU4 475 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ZIC4Q8N9L1 334 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ZNF485Q8NCK3 441 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ZNF540Q8NDQ6 660 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 OR6S1Q8NH40 331 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ASB10Q8WXI3 467 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ROBO4Q8WZ75 1007 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 MIB2Q96AX9 1013 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 OTULINQ96BN8 352 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 NMD3Q96D46 503 aaKnown RBP7.8□□□□□ -1.16
RIF1-208ENST00000457745 ZMYND19Q96E35 227 aaPredicted RBP7.8□□□□□ -1.16
RIF1-208ENST00000457745 RNFT2Q96EX2 444 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 KLHL15Q96M94 604 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 SFXN2Q96NB2 322 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 COPS4Q9BT78 406 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.8□□□□□ -1.16
RIF1-208ENST00000457745 OR51V1Q9H2C8 321 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ACOT13Q9NPJ3 140 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 SERINC1Q9NRX5 453 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 INIPQ9NRY2 104 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 CLN6Q9NWW5 311 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ENOPH1Q9UHY7 261 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 TEKT2Q9UIF3 430 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 BOKQ9UMX3 212 aaPredicted RBP7.8□□□□□ -1.16
RIF1-208ENST00000457745 COPS3Q9UNS2 423 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 COMMD3-BMI1R4GMX3 469 aa7.8□□□□□ -1.16
RIF1-208ENST00000457745 ANKRD11Q6UB99 2663 aaPredicted RBP7.8□□□□□ -1.16
RIF1-208ENST00000457745 ASPMQ8IZT6 3477 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 CACNA1AO00555 2505 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 A0A087WXM4 84 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 A0A1W2PNV4 684 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 TVP23AA6NH52 213 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 FAM47E-STBD1D6RA91 191 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 H3BSA7 217 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 K7ENP7 123 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 EIF1AYO14602 144 aaKnown RBP7.79□□□□□ -1.16
RIF1-208ENST00000457745 PRODHO43272 600 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 RNF13O43567 381 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 RGS10O43665 173 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 MPZL1O95297 269 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 CLPTM1O96005 669 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 HMGN1P05114 100 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 CTLA4P16410 223 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 SPI1P17947 270 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 NR4A1P22736 598 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 AHCYP23526 432 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 ADH6P28332 368 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 HTR1FP30939 366 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 SDHAP31040 664 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 ACVR1BP36896 505 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 TGFBR1P36897 503 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 PPIAP62937 165 aaKnown RBP7.79□□□□□ -1.16
RIF1-208ENST00000457745 RAC1P63000 192 aa7.79□□□□□ -1.16
RIF1-208ENST00000457745 H3F3AP84243 136 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms