RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 IFI30P13284 250 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 HOXB6P17509 224 aaKnown RBP12.64□□□□□ -0.39
COL3A1-203ENST00000450867 IL32P24001 234 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
COL3A1-203ENST00000450867 MPGP29372 298 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 SLC9A3P48764 834 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 RASSF2P50749 326 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 SMIM11AP58511 58 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 FAPQ12884 760 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 FHL1Q13642 323 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 GABRA6Q16445 453 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 TIMM23BQ5SRD1 257 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 OR7E24Q6IFN5 339 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 NIPAL3Q6P499 406 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 HIST3H2AQ7L7L0 130 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 ZDHHC21Q8IVQ6 265 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 AQP12AQ8IXF9 295 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 UBE2J2Q8N2K1 259 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 C17orf78Q8N4C9 275 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 HSD17B8Q92506 261 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 HIST1H2ACQ93077 130 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 MCUR1Q96AQ8 359 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 CCDC124Q96CT7 223 aaKnown RBP12.64□□□□□ -0.39
COL3A1-203ENST00000450867 ADAD1Q96M93 576 aaKnown RBP12.64□□□□□ -0.39
COL3A1-203ENST00000450867 MUS81Q96NY9 551 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 CADM1Q9BY67 442 aaKnown RBP12.64□□□□□ -0.39
COL3A1-203ENST00000450867 UPB1Q9UBR1 384 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 TMEM5Q9Y2B1 443 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 V9GYQ6 96 aa12.64□□□□□ -0.39
COL3A1-203ENST00000450867 MYO9AB2RTY4 2548 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 TRBV4-1A0A0J9YWV2 114 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 OR5H1A6NKK0 313 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 GSC2O15499 205 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 KLF4O43474 513 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 DIRAS1O95057 198 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 OR6A2O95222 327 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 UMPSP11172 480 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 MAKP20794 623 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 LIMS1P48059 325 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 HMGA2P52926 109 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 FOXG1P55316 489 aaPredicted RBP12.63□□□□□ -0.39
COL3A1-203ENST00000450867 SH3BGRP55822 239 aaPredicted RBP12.63□□□□□ -0.39
COL3A1-203ENST00000450867 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 RPL18Q07020 188 aaKnown RBP12.63□□□□□ -0.39
COL3A1-203ENST00000450867 TSC22D1Q15714 1073 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 TAB1Q15750 504 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 STK11Q15831 433 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 ANKRD34AQ69YU3 496 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 PODNL1Q6PEZ8 512 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 ZNF730Q6ZMV8 503 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 SLC35D2Q76EJ3 337 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 LINGO2Q7L985 606 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 C20orf196Q8IYI0 205 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 OR6X1Q8NH79 312 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 SEPHS2Q99611 448 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 TRIM15Q9C019 465 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 LRMDAQ9H2I8 198 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 MED29Q9NX70 200 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 CSMD2Q7Z408 3487 aa12.63□□□□□ -0.39
COL3A1-203ENST00000450867 SH3PXD2BA1X283 911 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 SLC35F4A4IF30 521 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 CENPBD1B2RD01 187 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 ZNF587BE7ETH6 402 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 CASKO14936 926 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 UPK3AO75631 287 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 DNAJA1P31689 397 aaKnown RBP12.62□□□□□ -0.39
COL3A1-203ENST00000450867 LGALS3BPQ08380 585 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 SEC23BQ15437 767 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 FGD3Q5JSP0 725 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 TBPL2Q6SJ96 375 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 ZNF627Q7L945 461 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 WDFY1Q8IWB7 410 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 OR4K5Q8NGD3 323 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 TXNDC15Q96J42 360 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 LURAP1Q96LR2 239 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 MMADHCQ9H3L0 296 aaPredicted RBP12.62□□□□□ -0.39
COL3A1-203ENST00000450867 POMPQ9Y244 141 aa12.62□□□□□ -0.39
COL3A1-203ENST00000450867 EFCAB9A8MZ26 197 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 C11orf98E9PRG8 122 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 BLOC1S5-TXNDC5H3BN57 136 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 CDC42EP2O14613 210 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 RNF13O43567 381 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 KRT36O76013 467 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 GADD45GO95257 159 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 STAMBPO95630 424 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 IGHMP01871 453 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 IFNGR1P15260 489 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 AHCYP23526 432 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 AQP2P41181 271 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 OMPP47874 163 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 KRTAP10-9P60411 292 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 IL1RL1Q01638 556 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 CHRNB3Q05901 458 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 GK3PQ14409 553 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 TAF11Q15544 211 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 HIST3H3Q16695 136 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 FAM98BQ52LJ0 330 aaKnown RBP12.61□□□□□ -0.39
COL3A1-203ENST00000450867 BEX5Q5H9J7 111 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 HDDC2Q7Z4H3 204 aa12.61□□□□□ -0.39
COL3A1-203ENST00000450867 ADGRG5Q8IZF4 528 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms