RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SPINK14Q6IE38 97 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 GALNT16Q8N428 558 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 ADPRHL1Q8NDY3 354 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 OR10H4Q8NGA5 316 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 OR51L1Q8NGJ5 315 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 SMPDL3BQ92485 455 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 RPL3LQ92901 407 aaKnown RBP12.82□□□□□ -0.36
USP39-207ENST00000450066 SNX18Q96RF0 628 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 CNN2Q99439 309 aaKnown RBP12.82□□□□□ -0.36
USP39-207ENST00000450066 DEPPQ9NTK1 212 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 TRAPPC4Q9Y296 219 aa12.82□□□□□ -0.36
USP39-207ENST00000450066 CAB39Q9Y376 341 aaPredicted RBP12.82□□□□□ -0.36
USP39-207ENST00000450066 OR2M5A3KFT3 312 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 PLGP00747 810 aaPredicted RBP12.81□□□□□ -0.36
USP39-207ENST00000450066 MRPL3P09001 348 aaKnown RBP12.81□□□□□ -0.36
USP39-207ENST00000450066 CPEP16870 476 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 ACVR1BP36896 505 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 SOX8P57073 446 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 VBP1P61758 197 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 GALEQ14376 348 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 TMEM176BQ3YBM2 270 aaPredicted RBP12.81□□□□□ -0.36
USP39-207ENST00000450066 TIMM50Q3ZCQ8 353 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 RAET1LQ5VY80 246 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 ZNF322Q6U7Q0 402 aaPredicted RBP12.81□□□□□ -0.36
USP39-207ENST00000450066 TMPRSS11AQ6ZMR5 421 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 VASH2Q86V25 355 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 OR2T4Q8NH00 348 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 ZNRF4Q8WWF5 429 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 TM9SF4Q92544 642 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 OR5B2Q96R09 309 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 PIGQQ9BRB3 760 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 NDUFB11Q9NX14 153 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 PCDHGB7Q9Y5F8 929 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 A0A1W2PNV4 684 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 ARHGEF9O43307 516 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 AKR7A3O95154 331 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 WDPCPO95876 746 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 F10P00742 488 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 ZNF182P17025 639 aaPredicted RBP12.81□□□□□ -0.36
USP39-207ENST00000450066 SFTPDP35247 375 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 CD79BP40259 229 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 LSM3P62310 102 aaKnown RBP12.81□□□□□ -0.36
USP39-207ENST00000450066 ACSM1Q08AH1 577 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 C19orf57Q0VDD7 668 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 TPBGQ13641 420 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 LINC01590Q5TEZ4 76 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 PXKQ7Z7A4 578 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 PHC2Q8IXK0 858 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 MIB2Q96AX9 1013 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 C5orf34Q96MH7 638 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 TIMP4Q99727 224 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 ALG12Q9BV10 488 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 ALG8Q9BVK2 526 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 ZFP64Q9NPA5 681 aa12.81□□□□□ -0.36
USP39-207ENST00000450066 MRPS18CQ9Y3D5 142 aaKnown RBP12.81□□□□□ -0.36
USP39-207ENST00000450066 PRSS37A4D1T9 235 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 ARGFXA6NJG6 315 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 BCL10O95999 233 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 OPN1LWP04000 364 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 OR2T7P0C7T2 308 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 HLA-DOBP13765 273 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 SHC1P29353 583 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 DAP3P51398 398 aaKnown RBP12.8□□□□□ -0.36
USP39-207ENST00000450066 GPR85P60893 370 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 NCS1P62166 190 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 OR1C1Q15619 314 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 LINC00696Q6ZRV3 163 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 OR6V1Q8N148 313 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 KDM8Q8N371 416 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 OR6K6Q8NGW6 343 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 OR2T27Q8NH04 317 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 TSSK2Q96PF2 358 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 SIGLEC12Q96PQ1 595 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 TBX5Q99593 518 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 FAM173AQ9BQD7 235 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 OR51E2Q9H255 320 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 SYT4Q9H2B2 425 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 VSX1Q9NZR4 365 aaPredicted RBP12.8□□□□□ -0.36
USP39-207ENST00000450066 CDV3Q9UKY7 258 aaKnown RBP12.8□□□□□ -0.36
USP39-207ENST00000450066 BOKQ9UMX3 212 aaPredicted RBP12.8□□□□□ -0.36
USP39-207ENST00000450066 NOX1Q9Y5S8 564 aa12.8□□□□□ -0.36
USP39-207ENST00000450066 A0A1W2PNR3 127 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 A0A1W2PQL4 384 aaPredicted RBP12.79□□□□□ -0.36
USP39-207ENST00000450066 A6NIZ1 184 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 H7C1C5 153 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 AKAP8O43823 692 aaKnown RBP12.79□□□□□ -0.36
USP39-207ENST00000450066 PMS2P2O95744 297 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 OR2B6P58173 313 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 RAP1BP61224 184 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 LCN6P62502 163 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 RAP1AP62834 184 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 RAC1P63000 192 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 NHLH1Q02575 133 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 FOXO1Q12778 655 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 ZNF239Q16600 458 aaKnown RBP12.79□□□□□ -0.36
USP39-207ENST00000450066 EEF1A1P5Q5VTE0 462 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 AGAP7PQ5VUJ5 663 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 LIPKQ5VXJ0 399 aa12.79□□□□□ -0.36
USP39-207ENST00000450066 TMPPEQ6ZT21 453 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms