RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 ITGAMP11215 1152 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 CSRP1P21291 193 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 TIGD3Q6B0B8 471 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 OR5M9Q8NGP3 310 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ASB17Q8WXJ9 295 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 PDCD10Q9BUL8 212 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 SLC19A3Q9BZV2 496 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 PILRAQ9UKJ1 303 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 NUP214P35658 2090 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 SMIM30A4D0T7 59 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ATF4P18848 351 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 EIF2S3P41091 472 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 EFNA3P52797 238 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 GABARAPL2P60520 117 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 RPL27P61353 136 aaKnown RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 RAB39AQ14964 217 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 TMEM244Q5VVB8 128 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 PGBD2Q6P3X8 592 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 TMPRSS7Q7RTY8 843 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 LRRC56Q8IYG6 542 aaPredicted RBP12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 DMRTB1Q96MA1 342 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 ACTR6Q9GZN1 396 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 FKRPQ9H9S5 495 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 B3GALT5Q9Y2C3 310 aa12.86□□□□□ -0.35
SMARCA4-204ENST00000444061 TMEM225BP0DP42 221 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 MZT1Q08AG7 82 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 PRSS48Q7RTY5 328 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 BORCS8Q96FH0 119 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 NEDD4LQ96PU5 975 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 C12orf4Q9NQ89 552 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 IGKV1-8A0A0C4DH67 115 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF593O00488 134 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 DVL2O14641 736 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 GALNSP34059 522 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 TGIF1Q15583 401 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 NKAPLQ5M9Q1 402 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 ASCC1Q8N9N2 400 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 OR9K2Q8NGE7 335 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 UBQLN3Q9H347 655 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 OSGIN1Q9UJX0 560 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 ALG1L2C9J202 215 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 TNFSF11O14788 317 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 ABHD16AO95870 558 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 WNT4P56705 351 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 KIRREL2Q6UWL6 708 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 CCDC28AQ8IWP9 274 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 GPR148Q8TDV2 347 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 ELOVL3Q9HB03 270 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 AASSQ9UDR5 926 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 ANK1P16157 1881 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 ALPLP05186 524 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 CLUP10909 449 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 FRKP42685 505 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 DAPP51397 102 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 MAB21L1Q13394 359 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 SPINK14Q6IE38 97 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 Q6ZPB1 254 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 TMEM17Q86X19 198 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 BARD1Q99728 777 aaKnown RBP12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 ANKRD60Q9BZ19 345 aa12.85□□□□□ -0.35
SMARCA4-204ENST00000444061 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 MEGF11A6BM72 1044 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 CNR1P21554 472 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 UQCRC1P31930 480 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 OR2A2Q6IF42 318 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 STK35Q8TDR2 534 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 GIMAP5Q96F15 307 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 S100A16Q96FQ6 103 aaKnown RBP12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF845Q96IR2 970 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 CLCC1Q96S66 551 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 VNN3Q9NY84 501 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 CD8B2A6NJW9 211 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 CD8BP10966 210 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 ZNF182P17025 639 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 NKPD1Q17RQ9 610 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 SLC25A24Q6NUK1 477 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 CPNE4Q96A23 557 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 RASD2Q96D21 266 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 MED20Q9H944 212 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 TMPRSS3P57727 454 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 LRRN1Q6UXK5 716 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 OXGR1Q96P68 337 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 RGS9O75916 674 aaPredicted RBP12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 PSMB10P40306 273 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.84□□□□□ -0.356e-8■■■■■ 50.8
SMARCA4-204ENST00000444061 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 OBP2BQ9NPH6 170 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 INPP5EQ9NRR6 644 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 HHLA2Q9UM44 414 aa12.84□□□□□ -0.35
SMARCA4-204ENST00000444061 TSPAN4O14817 238 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 NKX2-8O15522 239 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 MAS1P04201 325 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 RAB40ALP0C0E4 278 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 CD97P48960 835 aa12.83□□□□□ -0.36
SMARCA4-204ENST00000444061 SNU13P55769 128 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms