RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 PAX7P23759 505 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 NR1H2P55055 460 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 SH3BGRP55822 239 aaPredicted RBP13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 MS4A2Q01362 244 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 RPL18Q07020 188 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 TSC22D1Q15714 1073 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 TAB1Q15750 504 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 GABRA6Q16445 453 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 BEX5Q5H9J7 111 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 PGM2L1Q6PCE3 622 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 TMPRSS11FQ6ZWK6 438 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 SLC35D2Q76EJ3 337 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 NRMQ8IXM6 262 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 TMEM123Q8N131 208 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 GPR137CQ8N3F9 429 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 OR6X1Q8NH79 312 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 SLC7A13Q8TCU3 470 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 MUCL1Q96DR8 90 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 ZC3HAV1LQ96H79 300 aaKnown RBP13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 HIF3AQ9Y2N7 669 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 V9GYQ6 96 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 DCHS2Q6V1P9 2916 aa13.23□□□□□ -0.29
CSNK1E-210ENST00000442216 APCP25054 2843 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 NBPF19A0A087WUL8 3843 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 SLC35F4A4IF30 521 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 NPIPB13A6NJU9 1138 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 ZNF726A6NNF4 738 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 NPIPB4C9JG80 1138 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 ACOT8O14734 319 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 KLF4O43474 513 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 PIP5K1CO60331 668 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 UPK3AO75631 287 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 RAD51DO75771 328 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 DNAJC8O75937 253 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 IFNGR1P15260 489 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 HOXB6P17509 224 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 MAGEA2P43356 314 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 FOXG1P55316 489 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 KRTAP10-9P60411 292 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 RPS4XP62701 263 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 FOXD4Q12950 439 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 PPA1Q15181 289 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 TAF11Q15544 211 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 STK11Q15831 433 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 FBXW10Q5XX13 1052 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 HMBOX1Q6NT76 420 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 HDDC2Q7Z4H3 204 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 CDC20BQ86Y33 519 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 ZDHHC21Q8IVQ6 265 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 C20orf196Q8IYI0 205 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 TXNDC15Q96J42 360 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 CLPTM1LQ96KA5 538 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 LRGUKQ96M69 825 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 TRIM15Q9C019 465 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 OBP2BQ9NPH6 170 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 KRCC1Q9NPI7 259 aaPredicted RBP13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 B3GAT2Q9NPZ5 323 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 MED29Q9NX70 200 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 STX18Q9P2W9 335 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 HEATR1Q9H583 2144 aaKnown RBP13.22□□□□□ -0.29
CSNK1E-210ENST00000442216 RAI1Q7Z5J4 1906 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 A0A1W2PRG6 482 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 AQP12BA6NM10 295 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 CENPBD1B2RD01 187 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 SIAH2O43255 324 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 KRT36O76013 467 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 GADD45GO95257 159 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 BCL10O95999 233 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 SAGP10523 405 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 HOXB1P14653 301 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 MAKP20794 623 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 LOXP28300 417 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 FGD3Q5JSP0 725 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 PODNL1Q6PEZ8 512 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 TBPL2Q6SJ96 375 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 WFDC8Q8IUA0 241 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 AQP12AQ8IXF9 295 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 MAGEE2Q8TD90 523 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 CCDC124Q96CT7 223 aaKnown RBP13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 ALKBH3Q96Q83 286 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 SEPHS2Q99611 448 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 FUZQ9BT04 418 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 EMC6Q9BV81 110 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 MMADHCQ9H3L0 296 aaPredicted RBP13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 GPR35Q9HC97 309 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 INIPQ9NRY2 104 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 AMDHD2Q9Y303 409 aa13.21□□□□□ -0.29
CSNK1E-210ENST00000442216 ABCA12Q86UK0 2595 aa13.21□□□□□ -0.3
CSNK1E-210ENST00000442216 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 EFCAB9A8MZ26 197 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 GSC2O15499 205 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 DIRAS1O95057 198 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 HOXC12P31275 282 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 AQP2P41181 271 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 DAP3P51398 398 aaKnown RBP13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 HMGA2P52926 109 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 BIDP55957 195 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 PRPS1P60891 318 aa13.2□□□□□ -0.3
CSNK1E-210ENST00000442216 LSM11P83369 360 aaKnown RBP eCLIP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms